RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RWDD4Q6NW29 188 aaKnown RBP19.87■□□□□ 0.77
CCDC47-202ENST00000403162 RANBP10Q6VN20 620 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 ZBTB49Q6ZSB9 765 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TMEM86AQ8N2M4 240 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 PACRGLQ8N7B6 248 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 OR2T34Q8NGX1 318 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 OR2T3Q8NH03 318 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TMIGD2Q96BF3 282 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 HIPK3Q9H422 1215 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 GSTO2Q9H4Y5 243 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 IGFBP6P24592 240 aaPredicted RBP19.87■□□□□ 0.77
CCDC47-202ENST00000403162 NDST2P52849 883 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 ACAP2Q15057 778 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 LRRC26Q2I0M4 334 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 LARP4Q71RC2 724 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCDC47-202ENST00000403162 ERMP1Q7Z2K6 904 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 CALML6Q8TD86 181 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TFAP2CQ92754 450 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 ZUFSPQ96AP4 578 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TSPAN17Q96FV3 270 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 UBXN10Q96LJ8 280 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 FSD1LQ9BXM9 530 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TUBA8Q9NY65 449 aaPredicted RBP19.87■□□□□ 0.77
CCDC47-202ENST00000403162 MTF2Q9Y483 593 aaPredicted RBP19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TRAF6Q9Y4K3 522 aa19.87■□□□□ 0.77
CCDC47-202ENST00000403162 TRIM64CA6NLI5 447 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 BBIP1A8MTZ0 92 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 MGEA5O60502 916 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 HOXC13P31276 330 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 LEPRP48357 1165 aaKnown RBP19.86■□□□□ 0.77
CCDC47-202ENST00000403162 SLC7A2P52569 658 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 ADARP55265 1226 aaKnown RBP19.86■□□□□ 0.77
CCDC47-202ENST00000403162 KCTD21Q4G0X4 260 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 DHRS4L2Q6PKH6 230 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 CYHR1Q6ZMK1 362 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 RPS27LQ71UM5 84 aaKnown RBP19.86■□□□□ 0.77
CCDC47-202ENST00000403162 LZTR1Q8N653 840 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 MFSD2AQ8NA29 543 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 RNF34Q969K3 372 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 PPWD1Q96BP3 646 aaKnown RBP19.86■□□□□ 0.77
CCDC47-202ENST00000403162 SMARCD1Q96GM5 515 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 MRGPRX2Q96LB1 330 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 TCF12Q99081 682 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 FAM105AQ9NUU6 356 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 LMCD1Q9NZU5 365 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 BPTFQ12830 3046 aa19.86■□□□□ 0.77
CCDC47-202ENST00000403162 ZNF839A8K0R7 811 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 TIPRLO75663 272 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 PRKCQQ04759 706 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 SEPT6Q14141 434 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 RNF135Q8IUD6 432 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 PCYOX1LQ8NBM8 494 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 GRIN3AQ8TCU5 1115 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 FAM210AQ96ND0 272 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 ADAM2Q99965 735 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 PLOD2O00469 737 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 SOCS2O14508 198 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 PMPCBO75439 489 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 HLA-DQB2P05538 268 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 NELFEP18615 380 aaKnown RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 EN2P19622 333 aaPredicted RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 IMPDH1P20839 514 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 HTR7P34969 479 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 CHRNA4P43681 627 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 DSC3Q14574 896 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 INTS11Q5TA45 600 aaKnown RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 LAYNQ6UX15 382 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 GALNT7Q86SF2 657 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 OR9I1Q8NGQ6 314 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 GABPB2Q8TAK5 448 aaPredicted RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 DQX1Q8TE96 717 aaKnown RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 CANT1Q8WVQ1 401 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 L3HYPDHQ96EM0 354 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 GPATCH1Q9BRR8 931 aaKnown RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 CSNK1G1Q9HCP0 422 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 CCM2LQ9NUG4 571 aaPredicted RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 PTBP2Q9UKA9 531 aaKnown RBP19.85■□□□□ 0.77
CCDC47-202ENST00000403162 CDH9Q9ULB4 789 aa19.85■□□□□ 0.77
CCDC47-202ENST00000403162 UBFD1O14562 309 aaKnown RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 FGF10O15520 208 aaPredicted RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 PFDN1O60925 122 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 NBNO60934 754 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 IGLV3-25P01717 112 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 CKMT2P17540 419 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 ATP6V1B2P21281 511 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 GPX3P22352 226 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 YWHAQP27348 245 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 PLK1P53350 603 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 CCL23P55773 120 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 STX1BP61266 288 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 MAP7D1Q3KQU3 841 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 ZNF789Q5FWF6 425 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 FUNDC1Q8IVP5 155 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 FAM47BQ8NA70 645 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 PHF21BQ96EK2 531 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 SLC39A8Q9C0K1 460 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 TSPYL2Q9H2G4 693 aaPredicted RBP19.84■□□□□ 0.77
CCDC47-202ENST00000403162 VPS45Q9NRW7 570 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 TMEM39AQ9NV64 488 aa19.84■□□□□ 0.77
CCDC47-202ENST00000403162 TBC1D13Q9NVG8 400 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms