RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 LEF1Q9UJU2 399 aaPredicted RBP18.56■□□□□ 0.56
USP48-204ENST00000400301 ZNF711Q9Y462 761 aa18.56■□□□□ 0.56
USP48-204ENST00000400301 TTC24A2A3L6 582 aaPredicted RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 MEIS3P2A8K0S8 358 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TACR2P21452 398 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 MC4RP32245 332 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 PBX3P40426 434 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 PURAQ00577 322 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 NIPAL4Q0D2K0 466 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 DPYSQ14117 519 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 PGS1Q32NB8 556 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 MTX3Q5HYI7 312 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 ANKS3Q6ZW76 656 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 MOCOSQ96EN8 888 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 ASB8Q9H765 288 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TNPO3Q9Y5L0 923 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 RBM20Q5T481 1227 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 RBM44Q6ZP01 1051 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 MAGEE2Q8TD90 523 aaPredicted RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 DCUN1D5Q9BTE7 237 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 KIFC1Q9BW19 673 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TBC1D23Q9NUY8 699 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 OPTCQ9UBM4 332 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 KLQ9UEF7 1012 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TP73O15350 636 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 GOT2P00505 430 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 MLLT6P55198 1093 aaPredicted RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 VPS26BQ4G0F5 336 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 C6orf52Q5T4I8 152 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TMEM135Q86UB9 458 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TWIST2Q8WVJ9 160 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TBCDQ9BTW9 1192 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 STX16-NPEPL1H3BU86 382 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 IDO1P14902 403 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 PRKG2Q13237 762 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 SLC5A9Q2M3M2 681 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 DDX53Q86TM3 631 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 DCBLD1Q8N8Z6 715 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 ZNF778Q96MU6 729 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 TRMT13Q9NUP7 481 aaKnown RBP18.55■□□□□ 0.56
USP48-204ENST00000400301 EURLQ9NYK6 297 aa18.55■□□□□ 0.56
USP48-204ENST00000400301 UBXN8O00124 270 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 HORMAD1Q86X24 394 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 NPWQ8N729 165 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 ITFG1Q8TB96 612 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 GPR21Q99679 349 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 RMND5AQ9H871 391 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 MTMR10Q9NXD2 777 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 A0A087WXM4 84 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 MATN2O00339 956 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 CTPS1P17812 591 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 OR1D2P34982 312 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 HALP42357 657 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 NR1H2P55055 460 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 REP15Q6BDI9 236 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 PAOXQ6QHF9 649 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 B3GNT6Q6ZMB0 384 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 STYXQ8WUJ0 223 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 BTBD9Q96Q07 612 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 FAM126AQ9BYI3 521 aaPredicted RBP18.54■□□□□ 0.56
USP48-204ENST00000400301 HS3ST4Q9Y661 456 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 COPG1Q9Y678 874 aaKnown RBP18.54■□□□□ 0.56
USP48-204ENST00000400301 J3KR12 359 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 FFAR3O14843 346 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 GPR42O15529 346 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 ADCY6O43306 1168 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 SNNO75324 88 aaPredicted RBP18.54■□□□□ 0.56
USP48-204ENST00000400301 ZNF682O95780 498 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 PPP3CCP48454 512 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 VAC14Q08AM6 782 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 TRIM25Q14258 630 aaKnown RBP18.54■□□□□ 0.56
USP48-204ENST00000400301 VPS37AQ8NEZ2 397 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 OSBPL11Q9BXB4 747 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 KCNK13Q9HB14 408 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 GPBP1L1Q9HC44 474 aaPredicted RBP18.54■□□□□ 0.56
USP48-204ENST00000400301 COMMD3-BMI1R4GMX3 469 aa18.54■□□□□ 0.56
USP48-204ENST00000400301 PTGESO14684 152 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 ZBTB14O43829 449 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 PKMP14618 531 aaKnown RBP18.53■□□□□ 0.56
USP48-204ENST00000400301 MAGEA6P43360 314 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 LRRC8DQ7L1W4 858 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP48-204ENST00000400301 SH3KBP1Q96B97 665 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 TUBGCP5Q96RT8 1024 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 TCF12Q99081 682 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 A0A0U1RQF3 1178 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 SEPT4O43236 478 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 IL10RBQ08334 325 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 NEDD8Q15843 81 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 MARCH8Q5T0T0 291 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 FBXO27Q8NI29 283 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 OXCT2Q9BYC2 517 aaPredicted RBP18.53■□□□□ 0.56
USP48-204ENST00000400301 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 NPEPPSL1A6NEC2 478 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 A8MT66 165 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 ALDH1A2O94788 518 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 BNIP2Q12982 314 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 TRIP4Q15650 581 aaPredicted RBP18.53■□□□□ 0.56
USP48-204ENST00000400301 LDLRAD1Q5T700 205 aa18.53■□□□□ 0.56
USP48-204ENST00000400301 VPS33AQ96AX1 596 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms