RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ZFHX4Q86UP3 3567 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 A0A0J9YYE9 177 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 PDE2AO00408 941 aaPredicted RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 APOL1O14791 398 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 YY2O15391 372 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 SPOPO43791 374 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 MT-CO3P00414 261 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 TNFP01375 233 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 TRBC1P01850 177 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 KRT1P04264 644 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 PDHA1P08559 390 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 ZNF30P17039 623 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 TEAD1P28347 426 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 CYLC1P35663 651 aaPredicted RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 ZNF75DP51815 510 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 RPL26P61254 145 aaKnown RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 DSC2Q02487 901 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 DPTQ07507 201 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 CYP4F3Q08477 520 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 IHHQ14623 411 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 RTP5Q14D33 572 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 PDK1Q15118 436 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 ODF2Q5BJF6 829 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 GKN2Q86XP6 184 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 SLC35F3Q8IY50 421 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 OR56A4Q8NGH8 313 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 SCG3Q8WXD2 468 aaKnown RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 NAT6Q93015 286 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 PDXPQ96GD0 296 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 OLFM3Q96PB7 478 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 RBM15Q96T37 977 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 LGMNQ99538 433 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 MAK16Q9BXY0 300 aaKnown RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 BRD8Q9H0E9 1235 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 LUC7LQ9NQ29 371 aaKnown RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 RPL26L1Q9UNX3 145 aaKnown RBP14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 HEY1Q9Y5J3 304 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 RP1P56715 2156 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 LAMA5O15230 3695 aa14.88□□□□□ -0.03
SMIM11A-203ENST00000399299 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TMEM202A6NGA9 273 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 PPP1R12AO14974 1030 aaPredicted RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 CELA2BP08218 269 aaPredicted RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 MYCLP1P12525 358 aaPredicted RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 MYF5P13349 255 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 COMTP21964 271 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 FECHP22830 423 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 ETV3P41162 512 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 NIPAL4Q0D2K0 466 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TAZQ16635 292 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 CDKN3Q16667 212 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 GUSBP11Q6P575 273 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 EFL1Q7Z2Z2 1120 aaKnown RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 HSD11B1LQ7Z5J1 315 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TECPR1Q7Z6L1 1165 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TSPAN33Q86UF1 283 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 RAVER1Q8IY67 606 aaKnown RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 PELI3Q8N2H9 469 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 OR1E3Q8WZA6 343 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 PANX2Q96RD6 677 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 LYSMD1Q96S90 227 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TEX101Q9BY14 249 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 RBSNQ9H1K0 784 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 FGF22Q9HCT0 170 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 PHPT1Q9NRX4 125 aaPredicted RBP14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 DOLKQ9UPQ8 538 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 TTLL3Q9Y4R7 772 aa14.87□□□□□ -0.03
SMIM11A-203ENST00000399299 CPED1A4D0V7 1026 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 CAPN8A6NHC0 703 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 KCNK1O00180 336 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 PRLP01236 227 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 JCHAINP01591 159 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 CTPS1P17812 591 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 NOP2P46087 812 aaKnown RBP14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 NR2C2P49116 596 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 EPHB1P54762 984 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 ZBTB17Q13105 803 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 TFDP2Q14188 446 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 SPA17Q15506 151 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 LRRC66Q68CR7 880 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 DENND2CQ68D51 928 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 KCTD16Q68DU8 428 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 CRTC1Q6UUV9 634 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 MFSD7Q6UXD7 560 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 Q6ZVL8 140 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 ZNF765Q7L2R6 523 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 NLRP8Q86W28 1048 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 ARL10Q8N8L6 244 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 WDR48Q8TAF3 677 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 MAPK15Q8TD08 544 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 LRRN4Q8WUT4 740 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 DEPDC7Q96QD5 511 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 LGR4Q9BXB1 951 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 ABCG4Q9H172 646 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 PCDH9Q9HC56 1237 aa14.86□□□□□ -0.03
SMIM11A-203ENST00000399299 CHKBQ9Y259 395 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms