RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TSGA10Q9BZW7 698 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 GLOD4Q9HC38 313 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TOR4AQ9NXH8 423 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ARID1BQ8NFD5 2236 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ANKRD66B4E2M5 251 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TRIM38O00635 465 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 FFAR2O15552 330 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CLDN7O95471 211 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CCDC175P0C221 793 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 JUNDP17535 347 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 NFKB1P19838 968 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CA4P22748 312 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 RBL1P28749 1068 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CETN2P41208 172 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 HNRNPKP61978 463 aaKnown RBP eCLIP14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 DNAJC3Q13217 504 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 MTM1Q13496 603 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PTK2BQ14289 1009 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 QPCTQ16769 361 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 INAVAQ3KP66 663 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CCDC157Q569K6 752 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 NDUFAF2Q8N183 169 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TSACCQ96A04 125 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TADA1Q96BN2 335 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 NUS1Q96E22 293 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TRIB3Q96RU7 358 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 LGR4Q9BXB1 951 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 KLHL8Q9P2G9 620 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 FTSJ1Q9UET6 329 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CD84Q9UIB8 345 aa14.1□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TCRBV7S2A1N4TA0A589 114 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CAPN8A6NHC0 703 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 HACD1B0YJ81 288 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 SCAMP1O15126 338 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TNFSF14O43557 240 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 HYAL3O43820 417 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PMPCBO75439 489 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TJP3O95049 919 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 LDOC1O95751 146 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 C1SP09871 688 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PIRTP0C851 137 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 GIMD1P0DJR0 217 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TRIM23P36406 574 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 EIF3EP60228 445 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 RPL26P61254 145 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 XRCC4Q13426 336 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 C1orf61Q13536 156 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TCEA2Q15560 299 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ESRP1Q6NXG1 681 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PNCKQ6P2M8 343 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ENPP7Q6UWV6 458 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 MACC1Q6ZN28 852 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PID1Q7Z2X4 250 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 RD3Q7Z3Z2 195 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 TECPR1Q7Z6L1 1165 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 PHACTR4Q8IZ21 702 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 ZNF548Q8NEK5 533 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 CNDP2Q96KP4 475 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 MLPHQ9BV36 600 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 RPL26L1Q9UNX3 145 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 WASF3Q9UPY6 502 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 FRYQ5TBA9 3013 aa14.09□□□□□ -0.15
HLA-DQB1-202ENST00000399079 C1orf232A0A0U1RR37 186 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA6CA6NDK9 693 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA6BA6NDN3 693 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TMEM202A6NGA9 273 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PSMD11O00231 422 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 TOR1BO14657 336 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MTSS1O43312 755 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SIGLEC6O43699 453 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GCATO75600 419 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PTMAP06454 111 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA6DP0CG33 693 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 RBP3P10745 1247 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HTR1BP28222 390 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PPARDQ03181 441 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CDK18Q07002 472 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 NFATC4Q14934 902 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CDKN3Q16667 212 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ALG11Q2TAA5 492 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 PRRT3Q5FWE3 981 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 FAXCQ5TGI0 409 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 HID1Q8IV36 788 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 CHCHD4Q8N4Q1 142 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 LMX1AQ8TE12 382 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 SCAMP4Q969E2 229 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 OXNAD1Q96HP4 312 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ADGRE3Q9BY15 652 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 GOLGA6AQ9NYA3 693 aa14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 APOBEC3BQ9UH17 382 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB1-202ENST00000399079 H3BM21 787 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ENC1O14682 589 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 AQP9O43315 295 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 MYF5P13349 255 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 ZNF30P17039 623 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 STC1P52823 247 aa14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 KLF1Q13351 362 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 DARS2Q6PI48 645 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-202ENST00000399079 OR4C6Q8NH72 309 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms