RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 MATN2O00339 956 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TRIM16O95361 564 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RAB27AP51159 221 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PFKFB4Q16877 469 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CDYL2Q8N8U2 506 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DCBLD1Q8N8Z6 715 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PCYOX1LQ8NBM8 494 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 DNAJB14Q8TBM8 379 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MNTQ99583 582 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GPR22Q99680 433 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PALMDQ9NP74 551 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MARCH4Q9P2E8 410 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 UXTQ9UBK9 157 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 EVLQ9UI08 416 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZMYM5Q9UJ78 669 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PTGDR2Q9Y5Y4 395 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SCN11AQ9UI33 1791 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 OR4F21O95013 312 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ESRRGP62508 458 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 XIAPP98170 497 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PFKPQ01813 784 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ROR2Q01974 943 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TUSC3Q13454 348 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GTF2H3Q13889 308 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 C21orf62-AS1Q17RA5 79 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 FAM171A1Q5VUB5 890 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ALKAL1Q6UXT8 129 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MFSD6LQ8IWD5 586 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MIER2Q8N344 545 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC138Q96M89 665 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TRMT6Q9UJA5 497 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CLOCKO15516 846 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MGEA5O60502 916 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GUCA1CO95843 209 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TACR2P21452 398 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 NFKBIAP25963 317 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GATMP50440 423 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 RHOAP61586 193 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SULT2A1Q06520 285 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF177Q13360 481 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ITGA7Q13683 1181 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 ZIK1Q3SY52 487 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 PRR23CQ6ZRP0 262 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 KRT77Q7Z794 578 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 LRRTM3Q86VH5 581 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SLC22A9Q8IVM8 553 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 CLYBLQ8N0X4 340 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TWIST2Q8WVJ9 160 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 KCNA7Q96RP8 456 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 TCF12Q99081 682 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MRPL57Q9BQC6 102 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 GORASP1Q9BQQ3 440 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 UNC93B1Q9H1C4 597 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 SYTL2Q9HCH5 934 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 WDR6Q9NNW5 1121 aaKnown RBP4.94□□□□□ -1.62
SMAD4-202ENST00000398417 MRGBPQ9NV56 204 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 FKBPLQ9UIM3 349 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 COMMD3-BMI1R4GMX3 469 aa4.94□□□□□ -1.62
SMAD4-202ENST00000398417 A0A0J9YYE9 177 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CLASP2O75122 1294 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SBK3P0C264 359 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MBL2P11226 248 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OR1E1P30953 314 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ECT2LQ008S8 904 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 IMPG1Q17R60 797 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FAM110CQ1W6H9 321 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 BRMS1LQ5PSV4 323 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TAF2Q6P1X5 1199 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SCD5Q86SK9 330 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 HERC6Q8IVU3 1022 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 IGSF8Q969P0 613 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ULK4Q96C45 1275 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MRGPRX2Q96LB1 330 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 NSUN5Q96P11 429 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ACBD6Q9BR61 282 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ADNPQ9H2P0 1102 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 AGO3Q9H9G7 860 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 WARS2Q9UGM6 360 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TBKBP1A7MCY6 615 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FGF10O15520 208 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 POLD3Q15054 466 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 NADK2Q4G0N4 442 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC92Q53HC0 331 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CMPK2Q5EBM0 449 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KIAA0930Q6ICG6 404 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 POTEHQ6S545 545 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FIG4Q92562 907 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KCNN1Q92952 543 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RMND5BQ96G75 393 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 HIC2Q96JB3 615 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KLHL32Q96NJ5 620 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SLC39A3Q9BRY0 314 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 C11orf84Q9BUA3 381 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ZYG11BQ9C0D3 744 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SCUBE2Q9NQ36 999 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RIC8BQ9NVN3 520 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ETAA1Q9NY74 926 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CACNA1CQ13936 2221 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms