RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SUPT3HO75486 399 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZNF24P17028 368 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HDCP19113 662 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ADSLP30566 484 aaPredicted RBP18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MAGEA11P43364 429 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAM189BP81408 668 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC14A2Q15849 920 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RNF19BQ6ZMZ0 732 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ISCA2Q86U28 154 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PELI3Q8N2H9 469 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FATE1Q969F0 183 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 NR1H4Q96RI1 486 aaPredicted RBP18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CENPKQ9BS16 269 aa18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ATP6AP2A0A1C7CYW4 349 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SYN3O14994 580 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ATP6AP2O75787 350 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SUPT7LO94864 414 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GOT2P00505 430 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ASLP04424 464 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SEMA3AQ14563 771 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HMGCLL1Q8TB92 370 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TADA1Q96BN2 335 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PTERQ96BW5 349 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CCDC126Q96EE4 140 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GLT1D1Q96MS3 346 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 POLR1EQ9GZS1 481 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MTMR11A4FU01 709 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TRPA1O75762 1119 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PRSS56P0CW18 603 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TM4SF4P48230 202 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 DUSP4Q13115 394 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZNF235Q14590 738 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HERC3Q15034 1050 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MFSD4BQ5TF39 518 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZNF549Q6P9A3 640 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PCDH20Q8N6Y1 951 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 BHLHE22Q8NFJ8 381 aaPredicted RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SNRNP27Q8WVK2 155 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 LZICQ8WZA0 190 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GSTO2Q9H4Y5 243 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 EML4Q9HC35 981 aaKnown RBP18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TRPC7Q9HCX4 862 aa18.37■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TLR5O60602 858 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 VNN2O95498 520 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CDH13P55290 713 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PARP15Q460N3 678 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ABI1Q8IZP0 508 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CCDC167Q9P0B6 97 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ABT1Q9ULW3 272 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IGLV3-27P01718 113 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MRPL58Q14197 206 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PQLC1Q8N2U9 271 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZBTB8BQ8NAP8 495 aaPredicted RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 STON2Q8WXE9 905 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OLA1Q9NTK5 396 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZDHHC7Q9NXF8 308 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GREB1Q4ZG55 1949 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CCDC162PA2VCL2 907 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CAPN8A6NHC0 703 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 WISP3O95389 354 aaPredicted RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GLP2RO95838 553 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MAP7Q14244 749 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 RTP2Q5QGT7 225 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 LGI2Q8N0V4 545 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC35B4Q969S0 331 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MEAF6Q9HAF1 191 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CIDEBQ9UHD4 219 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PAIP2BQ9ULR5 123 aaKnown RBP18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PSMD13Q9UNM6 376 aa18.36■□□□□ 0.53
CHRFAM7A-202ENST00000397827 UBDO15205 165 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CD3EAPO15446 510 aaKnown RBP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PRAMEF11O60813 436 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TACR2P21452 398 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ME2P23368 584 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ALDH1A3P47895 512 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OR7D4Q8NG98 312 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ADA2Q9NZK5 511 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TRAF6Q9Y4K3 522 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PPP6CO00743 305 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TXNDC9O14530 226 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CASQ2O14958 399 aaPredicted RBP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 UQCRBP14927 111 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 IMPDH1P20839 514 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TIAL1Q01085 375 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PLOD1Q02809 727 aaPredicted RBP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MED21Q13503 144 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 AGKQ53H12 422 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 ZNF678Q5SXM1 525 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CHSY3Q70JA7 882 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SPATA24Q86W54 205 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC22A9Q8IVM8 553 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 EXOC2Q96KP1 924 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GCNAQ96QF7 691 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MRPL1Q9BYD6 325 aaKnown RBP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FBRSL1Q9HCM7 1045 aaKnown RBP18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MARCH5Q9NX47 278 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 VPS28Q9UK41 221 aa18.35■□□□□ 0.53
CHRFAM7A-202ENST00000397827 LRRC14BA6NHZ5 514 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SIX3O95343 332 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms