RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 LRRC72A6NJI9 287 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 MMP20O60882 483 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 RNGTTO60942 597 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PCDH8O95206 1070 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 C6P13671 934 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 GM2AP17900 193 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 HMGCLP35914 325 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 ZNF140P52738 457 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 NUBP1P53384 320 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 VSNL1P62760 191 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PDE1BQ01064 536 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 CREB5Q02930 508 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 LAMB3Q13751 1172 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 SEPT6Q14141 434 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 ZNF528Q3MIS6 628 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TMEM259Q4ZIN3 620 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 RAVER1Q8IY67 606 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 FAM160A2Q8N612 972 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 LRRC39Q96DD0 335 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 SPACA7Q96KW9 195 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 C1QTNF1Q9BXJ1 281 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 IL17CQ9P0M4 197 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 MBD1Q9UIS9 605 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 RIMKLBQ9ULI2 386 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 ZFR2Q9UPR6 939 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 KCTD3Q9Y597 815 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TEX264Q9Y6I9 313 aa19.47■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3DA0A087WVF3 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3IA0A087WXS9 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3EA0A087X179 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3KA0A087X1G2 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 A0A1W2PQU0 124 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3FA6NER0 549 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 C2orf81A6NN90 581 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3LB9A6J9 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 SLC4A1P02730 911 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3HP0C7X1 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 MYBL2P10244 700 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 LPOP22079 712 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PSMA3P25788 255 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PPP2CBP62714 309 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 RPS21P63220 83 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PPP2CAP67775 309 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PDIA2Q13087 525 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 SEL1L3Q68CR1 1132 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3GQ6DHY5 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3CQ6IPX1 549 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 CCNI2Q6ZMN8 369 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 NLRP9Q7RTR0 991 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 HSD11B1LQ7Z5J1 315 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TRIM69Q86WT6 500 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 HORMAD1Q86X24 394 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 IGDCC3Q8IVU1 814 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 TBC1D3Q8IZP1 549 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 MYRIPQ8NFW9 859 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 PEX13Q92968 403 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 STAMBPL1Q96FJ0 436 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 COQ10AQ96MF6 247 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 EBNA1BP2Q99848 306 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 C19orf43Q9BQ61 176 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 FAM126AQ9BYI3 521 aaPredicted RBP19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 SAYSD1Q9NPB0 183 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 RAB21Q9UL25 225 aa19.46■□□□□ 0.71
MAP1LC3A-203ENST00000397709 MAGEB16A2A368 324 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 PRR23AA6NEV1 266 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 IGLON5A6NGN9 336 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 FAM47DPA6NHR8 397 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 CTIFO43310 598 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 BUD23O43709 281 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 MCM3P25205 808 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 ELK3P41970 407 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 FASTKD3Q14CZ7 662 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 ANGPT1Q15389 498 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 ELF2Q15723 593 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TSTD2Q5T7W7 516 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 CASC4Q6P4E1 433 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 CEP128Q6ZU80 1094 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TECPR1Q7Z6L1 1165 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 GSPT2Q8IYD1 628 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 STYXQ8WUJ0 223 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 GPR174Q9BXC1 333 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 PARD6BQ9BYG5 372 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TSPYL1Q9H0U9 437 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 C6orf106Q9H6K1 298 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 CHRAC1Q9NRG0 131 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 PKD2L2Q9NZM6 624 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 SAMD15Q9P1V8 674 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 INVSQ9Y283 1065 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 MAD1L1Q9Y6D9 718 aa19.45■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TRPM6Q9BX84 2022 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 ZNF106Q9H2Y7 1883 aaKnown RBP19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 FAM237BA0A1B0GVD1 139 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 RGSL1A5PLK6 1076 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 STX7O15400 261 aaKnown RBP19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 GALR2O43603 387 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TM7SF2O76062 418 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 TUBBP07437 444 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 SP9P0CG40 484 aa19.44■□□□□ 0.7
MAP1LC3A-203ENST00000397709 PGAM1P18669 254 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms