RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SH2D4BQ5SQS7 431 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ESRP1Q6NXG1 681 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 CEP68Q76N32 757 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 IQCKQ8N0W5 287 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ASZ1Q8WWH4 475 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MED8Q96G25 268 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 KLF16Q9BXK1 252 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 VCX3BQ9H321 246 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ALG9Q9H6U8 611 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 OPTCQ9UBM4 332 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SLC13A4Q9UKG4 626 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MFHAS1Q9Y4C4 1052 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SBF1O95248 1867 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 TFEBP19484 476 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 OGNP20774 298 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MAPK1P28482 360 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 GRIA2P42262 883 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MSLNQ13421 630 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 PDCD2Q16342 344 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 TCEAL5Q5H9L2 206 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 CACHD1Q5VU97 1274 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MMAAQ8IVH4 418 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 RAVER1Q8IY67 606 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 LRIG1Q96JA1 1093 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MYRFLQ96LU7 910 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 TUBGCP5Q96RT8 1024 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MRPL57Q9BQC6 102 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 TRIM15Q9C019 465 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 NEUROG2Q9H2A3 272 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SNX15Q9NRS6 342 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 THAP1Q9NVV9 213 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 EIF3LQ9Y262 564 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 DNAJC16Q9Y2G8 782 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SOBPA7XYQ1 873 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SKAP2O75563 359 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 HOXB2P14652 356 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 KCNA4P22459 653 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ATP5F1P24539 256 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 FASTKD3Q14CZ7 662 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 KCTD19Q17RG1 926 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MPP7Q5T2T1 576 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 LRRC34Q8IZ02 419 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 FIBINQ8TAL6 211 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 CXorf40BQ96DE9 158 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SHCBP1LQ9BZQ2 653 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 PSD3Q9NYI0 1048 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MAN2B1O00754 1011 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SOCS5O75159 536 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SASH3O75995 380 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MYOGP15173 224 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 NMBRP28336 390 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 NRG1Q02297 640 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 MRPL58Q14197 206 aaKnown RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 KCNJ11Q14654 390 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 GPR33Q49SQ1 333 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 HTR3DQ70Z44 454 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 SLC46A2Q9BY10 475 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 C8orf33Q9H7E9 229 aaPredicted RBP8.28□□□□□ -1.08
PTPRD-204ENST00000397606 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 NENFQ9UMX5 172 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 PLXNB2O15031 1838 aa8.28□□□□□ -1.08
PTPRD-204ENST00000397606 ANKRD66B4E2M5 251 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 H3BQF6 201 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 CHUKO15111 745 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 TM7SF2O76062 418 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 KAT7O95251 611 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 BAG2O95816 211 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 COL6A2P12110 1019 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF30P17039 623 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 PTGER3P43115 390 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 CCR3P51677 355 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 TGM3Q08188 693 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 OVGP1Q12889 678 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 USP4Q13107 963 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 CPXM2Q8N436 756 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 PCYOX1LQ8NBM8 494 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 SHKBP1Q8TBC3 707 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 RDH11Q8TC12 318 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 FGF13Q92913 245 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 CMTM5Q96DZ9 223 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 RSRC1Q96IZ7 334 aaKnown RBP8.27□□□□□ -1.08
PTPRD-204ENST00000397606 ZNF641Q96N77 438 aaPredicted RBP8.27□□□□□ -1.08
PTPRD-204ENST00000397606 SPACA6W5XKT8 324 aa8.27□□□□□ -1.08
PTPRD-204ENST00000397606 WNT9AO14904 365 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 PIAS1O75925 651 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 GOT2P00505 430 aaKnown RBP8.27□□□□□ -1.09
PTPRD-204ENST00000397606 VAV1P15498 845 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 CEBPBP17676 345 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 NRLP54845 237 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 C21orf59P57076 290 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 SIRPB2Q5JXA9 342 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 ARHGAP36Q6ZRI8 547 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 LCA5Q86VQ0 697 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
PTPRD-204ENST00000397606 MRPL1Q9BYD6 325 aaKnown RBP8.27□□□□□ -1.09
PTPRD-204ENST00000397606 OSBPL7Q9BZF2 842 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms