RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MCCC1Q96RQ3 725 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 FOXQ1Q9C009 403 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 MKRN2Q9H000 416 aaKnown RBP21.21■□□□□ 0.99
CPNE1-204ENST00000397443 VPS18Q9P253 973 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 DKK3Q9UBP4 350 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 GGT7Q9UJ14 662 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 PKP3Q9Y446 797 aa21.21■□□□□ 0.99
CPNE1-204ENST00000397443 A0A1W2PQF6 199 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 TSPAN11A1L157 253 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 THOC5Q13769 683 aaKnown RBP21.2■□□□□ 0.98
CPNE1-204ENST00000397443 CST6Q15828 149 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 PDPK2PQ6A1A2 396 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 KIAA0930Q6ICG6 404 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-204ENST00000397443 LRRC6Q86X45 466 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 KCNV2Q8TDN2 545 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 CDKL2Q92772 493 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 PBXIP1Q96AQ6 731 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 ASB2Q96Q27 587 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 RSPH9Q9H1X1 276 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-204ENST00000397443 TRABDQ9H4I3 376 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 NLE1Q9NVX2 485 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-204ENST00000397443 FKBPLQ9UIM3 349 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 PPIL1Q9Y3C6 166 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 PSAT1Q9Y617 370 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 IKBKGQ9Y6K9 419 aa21.2■□□□□ 0.98
CPNE1-204ENST00000397443 FOXO6A8MYZ6 492 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 STK25O00506 426 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 RPP40O75818 363 aaKnown RBP21.19■□□□□ 0.98
CPNE1-204ENST00000397443 COPAP53621 1224 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 PRKCQQ04759 706 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 ARHGEF7Q14155 803 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 TMED2Q15363 201 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 CDKN3Q16667 212 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 FAM46CQ5VWP2 391 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 OR2T3Q8NH03 318 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 ATXN2LQ8WWM7 1075 aaKnown RBP21.19■□□□□ 0.98
CPNE1-204ENST00000397443 ARL8AQ96BM9 186 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 CD320Q9NPF0 282 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 WNT16Q9UBV4 365 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 CCDC162PA2VCL2 907 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 GOT2P00505 430 aaKnown RBP21.19■□□□□ 0.98
CPNE1-204ENST00000397443 INHBAP08476 426 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 ADRB3P13945 408 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 HMGCLP35914 325 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 CNTN1Q12860 1018 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 KCTD16Q68DU8 428 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 ERAP2Q6P179 960 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 DENND6AQ8IWF6 608 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 SPOCK2Q92563 424 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 CDKN2AIPNLQ96HQ2 116 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 NECAB3Q96P71 396 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-204ENST00000397443 WRAP53Q9BUR4 548 aaKnown RBP21.19■□□□□ 0.98
CPNE1-204ENST00000397443 LMAN1LQ9HAT1 526 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 IL17CQ9P0M4 197 aa21.19■□□□□ 0.98
CPNE1-204ENST00000397443 SYF2O95926 243 aaKnown RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 PRSS56P0CW18 603 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 CHRNB1P11230 501 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 CYP2A6P11509 494 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 P2RY2P41231 377 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ABCG1P45844 678 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 PDE1BQ01064 536 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 PTSQ03393 145 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 CTBP1Q13363 440 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 TEDDM1Q5T9Z0 273 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ZNF776Q68DI1 518 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ZNF470Q6ECI4 717 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 TMEM92Q6UXU6 159 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ERN2Q76MJ5 926 aaKnown RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 LDB1Q86U70 411 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 TMPRSS6Q8IU80 811 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 GJD3Q8N144 294 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 AADATQ8N5Z0 425 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 GANCQ8TET4 914 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ATXN7L3BQ96GX2 97 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 LYSMD1Q96S90 227 aa21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ROPN1BQ9BZX4 212 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 ROPN1Q9HAT0 212 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-204ENST00000397443 NEMP1O14524 444 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 RGS16O15492 202 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-204ENST00000397443 OPA1O60313 960 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 VIPR1P32241 457 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 NEK3P51956 506 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 RPS14P62263 151 aaKnown RBP21.17■□□□□ 0.98
CPNE1-204ENST00000397443 HSP90B2PQ58FF3 399 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 EOGTQ5NDL2 527 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 NEPROQ6NW34 567 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-204ENST00000397443 RFLNAQ6ZTI6 216 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 CYS1Q717R9 158 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 HCAR2Q8TDS4 363 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 DCAKDQ8WVC6 231 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 SLC44A1Q8WWI5 657 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 SRPK1Q96SB4 655 aaKnown RBP21.17■□□□□ 0.98
CPNE1-204ENST00000397443 TMEM109Q9BVC6 243 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 LTB4R2Q9NPC1 389 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 TXNDC16Q9P2K2 825 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 SERGEFQ9UGK8 458 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 A0A1W2PP55 124 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 FAM170BA6NMN3 283 aa21.17■□□□□ 0.98
CPNE1-204ENST00000397443 GPR39O43194 453 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms