RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PDE1BQ01064 536 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 SEMG2Q02383 582 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 TPRG1Q6ZUI0 275 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 PARS2Q7L3T8 475 aaKnown RBP27.52■■■□□ 2
CPNE1-203ENST00000397442 NDUFAF2Q8N183 169 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 IL17RCQ8NAC3 791 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 MZB1Q8WU39 189 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 ERLEC1Q96DZ1 483 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 GABRG3Q99928 467 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 ZFYVE1Q9HBF4 777 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 IKBKGQ9Y6K9 419 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 A8MX80 341 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 UPK3BL1B0FP48 263 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 HMGB1P1B2RPK0 211 aaPredicted RBP27.52■■■□□ 2
CPNE1-203ENST00000397442 UPK3BL2E5RIL1 263 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 KPNA3O00505 521 aaPredicted RBP27.52■■■□□ 2
CPNE1-203ENST00000397442 F7P08709 466 aaPredicted RBP27.52■■■□□ 2
CPNE1-203ENST00000397442 LHCGRP22888 699 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 NEPROQ6NW34 567 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 PACS1Q6VY07 963 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 FAM3CQ92520 227 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 ARRDC3Q96B67 414 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 MCMBPQ9BTE3 642 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 MFSD1Q9H3U5 465 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 B4GALT6Q9UBX8 382 aa27.52■■■□□ 2
CPNE1-203ENST00000397442 CCDC162PA2VCL2 907 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 OR51F1A6NGY5 319 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 ADAM23O75077 832 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 ITGB7P26010 798 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 NTSR1P30989 418 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 PRAMEP78395 509 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 MMAAQ8IVH4 418 aaKnown RBP27.51■■□□□ 1.99
CPNE1-203ENST00000397442 CPNE1Q99829 537 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 BPIFA1Q9NP55 256 aa27.51■■□□□ 1.99
CPNE1-203ENST00000397442 HMX2A2RU54 273 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 STX7O15400 261 aaKnown RBP27.5■■□□□ 1.99
CPNE1-203ENST00000397442 CD72P21854 359 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 CCINQ13939 588 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 LRRC66Q68CR7 880 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 DENND6AQ8IWF6 608 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 OR6P1Q8NGX9 317 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 RSPH9Q9H1X1 276 aaPredicted RBP27.5■■□□□ 1.99
CPNE1-203ENST00000397442 PCDH12Q9NPG4 1184 aa27.5■■□□□ 1.99
CPNE1-203ENST00000397442 GOT2P00505 430 aaKnown RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 IL1BP01584 269 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 MAGOHP61326 146 aaKnown RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 THOC5Q13769 683 aaKnown RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 PTAR1Q7Z6K3 402 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 DSG4Q86SJ6 1040 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 TTC7BQ86TV6 843 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 KRT222Q8N1A0 295 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 C19orf43Q9BQ61 176 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 FAM167BQ9BTA0 163 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 OGFRQ9NZT2 677 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 FKBPLQ9UIM3 349 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 H7C0S8 307 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 GP5P40197 560 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 SLC1A2P43004 574 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 PTSQ03393 145 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 CTBP1Q13363 440 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 MLF2Q15773 248 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 ZNF470Q6ECI4 717 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 KIAA1211LQ6NV74 962 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 STRA8Q7Z7C7 330 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 EXOC3L1Q86VI1 746 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 C2CD4AQ8NCU7 369 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 STMN4Q9H169 189 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 MARCH4Q9P2E8 410 aaPredicted RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 PKP3Q9Y446 797 aa27.49■■□□□ 1.99
CPNE1-203ENST00000397442 ZNF106Q9H2Y7 1883 aaKnown RBP27.49■■□□□ 1.99
CPNE1-203ENST00000397442 KLF8O95600 359 aaPredicted RBP27.48■■□□□ 1.99
CPNE1-203ENST00000397442 GABRB3P28472 473 aa27.48■■□□□ 1.99
CPNE1-203ENST00000397442 HADHAP40939 763 aa27.48■■□□□ 1.99
CPNE1-203ENST00000397442 MRPS21P82921 87 aaKnown RBP27.48■■□□□ 1.99
CPNE1-203ENST00000397442 TRABD2AQ86V40 505 aa27.48■■□□□ 1.99
CPNE1-203ENST00000397442 TXNDC5Q8NBS9 432 aaKnown RBP27.48■■□□□ 1.99
CPNE1-203ENST00000397442 CD248Q9HCU0 757 aa27.48■■□□□ 1.99
CPNE1-203ENST00000397442 NSMCE4AQ9NXX6 385 aa27.48■■□□□ 1.99
CPNE1-203ENST00000397442 C19orf67A6NJJ6 358 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 SPINT1O43278 529 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 PSMD8P48556 350 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 SERPINB9P50453 376 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 XIAPP98170 497 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 PEX6Q13608 980 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 PNPLA1Q8N8W4 532 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 GPR150Q8NGU9 434 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 OR4L1Q8NH43 312 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 CALML6Q8TD86 181 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 SGSM3Q96HU1 749 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 RBBP8Q99708 897 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 THEGQ9P2T0 379 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 FBXO5Q9UKT4 447 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 SORCS3Q9UPU3 1222 aa27.47■■□□□ 1.99
CPNE1-203ENST00000397442 IQANK1A0A1B0GTG1 560 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 A0A1W2PQF6 199 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 C1QTNF3-AMACRE9PGA6 284 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 PLK4O00444 970 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 SYNCRIPO60506 623 aaKnown RBP27.46■■□□□ 1.99
CPNE1-203ENST00000397442 AHSGP02765 367 aa27.46■■□□□ 1.99
CPNE1-203ENST00000397442 ATP5DP30049 168 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms