RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CLCN1P35523 988 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 PGDP52209 483 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 LIMK2P53671 638 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 PMS2P54278 862 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 KIAA1024LP59773 190 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 BIRC2Q13490 618 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TRA2AQ13595 282 aaKnown RBP eCLIP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 GRM3Q14832 879 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 INO80DQ53TQ3 878 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 KCTD16Q68DU8 428 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TRNP1Q6NT89 227 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 C17orf82Q86X59 251 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 KIAA1524Q8TCG1 905 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 OR1E3Q8WZA6 343 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 RTP4Q96DX8 246 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 HMCESQ96FZ2 354 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 LURAP1Q96LR2 239 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 MFRPQ9BY79 579 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 FGF22Q9HCT0 170 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 RCOR3Q9P2K3 495 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-203ENST00000397378 DNAI1Q9UI46 699 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 MAN1B1Q9UKM7 699 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 NEU3Q9UQ49 428 aa9.45□□□□□ -0.9
NEDD9-203ENST00000397378 GTPBP10A4D1E9 387 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 CDC14CA4D256 554 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 CFAP69A5D8W1 941 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 A6NCN8 305 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM202A6NGA9 273 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 RHPN2P1A8MT19 583 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 B4E171 279 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 PRSS44E7EML9 344 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 CACNB4O00305 520 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 ZW10O43264 779 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 STK17BO94768 372 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 BMP6P22004 513 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 KELP23276 732 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 MAN1A1P33908 653 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 ADRA1BP35368 520 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TRIM23P36406 574 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 DLSTP36957 453 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 MMP12P39900 470 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TSPAN7P41732 249 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 STAT5AP42229 794 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 GPR3P46089 330 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 PPM1FP49593 454 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 BPIFB4P59827 614 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 SQSTM1Q13501 440 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 ELOAQ14241 798 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 UGP2Q16851 508 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 EXOC3L4Q17RC7 722 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 ISM2Q6H9L7 571 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 GBP6Q6ZN66 633 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM135Q86UB9 458 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 SLC47A2Q86VL8 602 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 ELOA2Q8IYF1 753 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 FUBP1Q96AE4 644 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TMEM168Q9H0V1 697 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 TRIT1Q9H3H1 467 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 PCDH12Q9NPG4 1184 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 MRPL40Q9NQ50 206 aaKnown RBP9.44□□□□□ -0.9
NEDD9-203ENST00000397378 PLCB1Q9NQ66 1216 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 RPS6KL1Q9Y6S9 549 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
NEDD9-203ENST00000397378 HEATR9A2RTY3 570 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FAM72CH0Y354 149 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-203ENST00000397378 BUB1O43683 1085 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 KRT86O43790 486 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 KATNA1O75449 491 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 LRIG2O94898 1065 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 PCCBP05166 539 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 THRAP10827 490 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 CCNB1P14635 433 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 F8A1P23610 371 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 PON1P27169 355 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 CD1CP29017 333 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 STAT1P42224 750 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 LIG3P49916 1009 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 MAZP56270 477 aaKnown RBP9.43□□□□□ -0.9
NEDD9-203ENST00000397378 RHOAP61586 193 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 APBA1Q02410 837 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 PAK1Q13153 545 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
NEDD9-203ENST00000397378 ERAP2Q6P179 960 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms