RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TRAV19A0A0A6YYK7 116 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 A0A1B0GTH6 734 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 KCNJ13O60928 360 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 KERAO60938 352 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 RLN2P04090 185 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 NR4A1P22736 598 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PGDP52209 483 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CDH8P55286 799 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SNRPD1P62314 119 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 C2orf76Q3KRA6 126 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLCO6A1Q86UG4 719 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 AKAP1Q92667 903 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMU1-201ENST00000397149 BRF2Q9HAW0 419 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 HCN3Q9P1Z3 774 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 ACTL7BQ9Y614 415 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 RPP38P78345 283 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 PLGLB1Q02325 96 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 OC90Q02509 493 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 SEMA5AQ13591 1074 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 OR2AJ1Q8NGZ0 328 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PPCDCQ96CD2 204 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ZNF878C9JN71 531 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PPEF2O14830 753 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CSH1P0DML2 217 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CSH2P0DML3 217 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLC20A2Q08357 652 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 MAPK14Q16539 360 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 KLHL26Q53HC5 615 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 EPHA10Q5JZY3 1008 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 STXBP5Q5T5C0 1151 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 TMPRSS11AQ6ZMR5 421 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 CMTR2Q8IYT2 770 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 ADAMTS15Q8TE58 950 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 UXTQ9UBK9 157 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 SNX7Q9UNH6 387 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 MAU2Q9Y6X3 613 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 COL15A1P39059 1388 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ATP6AP2A0A1C7CYW4 349 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 IQCF5A8MTL0 148 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ATP6AP2O75787 350 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 SLC25A14O95258 325 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 MTHFD1P11586 935 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 MSR1P21757 451 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 AFF1P51825 1210 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 ZNF132P52740 706 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PPATQ06203 517 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 OR52J3Q8NH60 311 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 ARMC5Q96C12 935 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 PRICKLE1Q96MT3 831 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 OR52E6Q96RD3 313 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 GBA2Q9HCG7 927 aaPredicted RBP12.35□□□□□ -0.43
SMU1-201ENST00000397149 ANKRD6Q9Y2G4 727 aa12.35□□□□□ -0.43
SMU1-201ENST00000397149 LDOC1O95751 146 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 GNAO1P09471 354 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ANPEPP15144 967 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GNB3P16520 340 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 IL12BP29460 328 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 MLLT6P55198 1093 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 CA9Q16790 459 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 SHQ1Q6PI26 577 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 QSOX2Q6ZRP7 698 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FBXW8Q8N3Y1 598 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 SMARCD1Q96GM5 515 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 PCDHGB5Q9Y5G0 923 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 C15orf38-AP3S2A0A0A6YYH1 394 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ZNF823P16415 610 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 Q4G0T1 1027 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 SLC5A5Q92911 643 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 PTPN18Q99952 460 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 FRMD8P1Q9BZ68 369 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 OR51V1Q9H2C8 321 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 KCND2Q9NZV8 630 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 J3QRK9 145 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 NUAK1O60285 661 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GJB6O95452 261 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GADD45AP24522 165 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 RPL21P46778 160 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 PPP3CAQ08209 521 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 BNIP1Q12981 228 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ARFRP1Q13795 201 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 E2F2Q14209 437 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 MFSD10Q14728 455 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 RBM44Q6ZP01 1051 aaKnown RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 C12orf50Q8NA57 414 aaPredicted RBP12.34□□□□□ -0.43
SMU1-201ENST00000397149 AP2M1Q96CW1 435 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ZFP3Q96NJ6 502 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 TBX5Q99593 518 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 ZNF225Q9UK10 706 aa12.34□□□□□ -0.43
SMU1-201ENST00000397149 GAS2O43903 313 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms