RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DLC1Q96QB1 1528 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 ITIH1P19827 911 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 CNSTQ6PJW8 725 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 DIRAS2Q96HU8 199 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 AZIN1O14977 448 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 IGFBP5P24593 272 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 SLC7A2P52569 658 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF143P52747 638 aaPredicted RBP13.99□□□□□ -0.17
COL4A3-202ENST00000396578 DLG1Q12959 904 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 OR2L5Q8NG80 312 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 KCND1Q9NSA2 647 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 MARK1Q9P0L2 795 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 ZNF180Q9UJW8 692 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 CYP1A2P05177 515 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 SRSF11Q05519 484 aaKnown RBP13.99□□□□□ -0.17
COL4A3-202ENST00000396578 ZMYND11Q15326 602 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 TMEM119Q4V9L6 283 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 DSELQ8IZU8 1212 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 OR8H3Q8N146 312 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 GRIN3AQ8TCU5 1115 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 CSGALNACT1Q8TDX6 532 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 EVA1BQ9NVM1 165 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 GNEQ9Y223 722 aaKnown RBP13.99□□□□□ -0.17
COL4A3-202ENST00000396578 PMF1-BGLAPU3KQ54 211 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 XYLBO75191 536 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 GALNTL5Q7Z4T8 443 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 SLC4A11Q8NBS3 891 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 ELMO3Q96BJ8 720 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 CPS1P31327 1500 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 E7ENX8 843 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 DRG2P55039 364 aaKnown RBP13.99□□□□□ -0.17
COL4A3-202ENST00000396578 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 FATE1Q969F0 183 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 TTYH1Q9H313 450 aaPredicted RBP13.99□□□□□ -0.17
COL4A3-202ENST00000396578 LRRC19Q9H756 370 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 SETD4Q9NVD3 440 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 FADS3Q9Y5Q0 445 aa13.99□□□□□ -0.17
COL4A3-202ENST00000396578 SLC30A4O14863 429 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 AMD1P17707 334 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ATP5C1P36542 298 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 PFKPQ01813 784 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 EGFLAMQ63HQ2 1017 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 TAPT1Q6NXT6 567 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 BRD9Q9H8M2 597 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 U3KQV3 271 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SNX4O95219 450 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 NUDT17P0C025 328 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 DDR1Q08345 913 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ITGA7Q13683 1181 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 LY6KQ17RY6 165 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 JAZF1Q86VZ6 243 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RASAL3Q86YV0 1011 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 CRELD1Q96HD1 420 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 MECRQ9BV79 373 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SNX15Q9NRS6 342 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 POLR3HQ9Y535 204 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 A0A0J9YYE9 177 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 INSRRP14616 1297 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RARRES1P49788 294 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 E2F2Q14209 437 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RAET1GQ6H3X3 334 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RTL4Q6ZR62 310 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SEMA3GQ9NS98 782 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 KMOO15229 486 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 KCNQ2O43526 872 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 TRMUO75648 421 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 C6orf52Q5T4I8 152 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 WDR59Q6PJI9 974 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RIOX1Q9H6W3 641 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 MOV10Q9HCE1 1003 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 GJB6O95452 261 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 HNRNPLP14866 589 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 MAGP20916 626 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ATP6V0D1P61421 351 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 MPPE1Q53F39 396 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 PPCDCQ96CD2 204 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ZYG11BQ9C0D3 744 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 GCATO75600 419 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 FRMD7Q6ZUT3 714 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 CLHC1Q8NHS4 586 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 TSEN15Q8WW01 171 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SUSD6Q92537 303 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 STARD7Q9NQZ5 370 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 HUNKP57058 714 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ARF3P61204 181 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ARF1P84077 181 aaKnown RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 C15orf59Q2T9L4 293 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 ADCY4Q8NFM4 1077 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 OR52K2Q8NGK3 314 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-202ENST00000396578 RFT1Q96AA3 541 aa13.98□□□□□ -0.17
COL4A3-202ENST00000396578 SALL1Q9NSC2 1324 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms