RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CAAP1Q9H8G2 361 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 DNAAF2Q9NVR5 837 aaKnown RBP16.58■□□□□ 0.24
CXCL1-201ENST00000395761 CEP250Q9BV73 2442 aa16.58■□□□□ 0.24
CXCL1-201ENST00000395761 DMXL1Q9Y485 3027 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 LRRK1Q38SD2 2015 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 CAPN8A6NHC0 703 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 A6NNZ2 444 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 GCATO75600 419 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 CLDN7O95471 211 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 NDST3O95803 873 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 PIRTP0C851 137 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 ETV3P41162 512 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 MPP3Q13368 585 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 ARHGEF7Q14155 803 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 CDKN3Q16667 212 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF423Q2M1K9 1284 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 KYAT3Q6YP21 454 aaKnown RBP16.57■□□□□ 0.24
CXCL1-201ENST00000395761 Q6ZVL8 140 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 PLA2G15Q8NCC3 412 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 IPMKQ8NFU5 416 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 MAIP1Q8WWC4 291 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 LYSMD1Q96S90 227 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 NAP1L3Q99457 506 aaPredicted RBP16.57■□□□□ 0.24
CXCL1-201ENST00000395761 C1QTNF7Q9BXJ2 289 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 GDF3Q9NR23 364 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 SMARCAL1Q9NZC9 954 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
CXCL1-201ENST00000395761 CDV3Q9UKY7 258 aaKnown RBP16.57■□□□□ 0.24
CXCL1-201ENST00000395761 SLC30A4O14863 429 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF185O15231 689 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 MAGEC1O60732 1142 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 OPHN1O60890 802 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 METTL18O95568 372 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 CER1O95813 267 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 PCCBP05166 539 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 C1SP09871 688 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
CXCL1-201ENST00000395761 CHRNA4P43681 627 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 PFN3P60673 137 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 OLIG2Q13516 323 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 INPP5AQ14642 412 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 SHBQ15464 509 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 CCNG2Q16589 344 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 TECPR1Q7Z6L1 1165 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 PRUNE1Q86TP1 453 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 PELI3Q8N2H9 469 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 TAB3Q8N5C8 712 aaPredicted RBP16.56■□□□□ 0.24
CXCL1-201ENST00000395761 SLC25A41Q8N5S1 370 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 GPR27Q9NS67 375 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF148Q9UQR1 794 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 SPO11Q9Y5K1 396 aa16.56■□□□□ 0.24
CXCL1-201ENST00000395761 C1orf232A0A0U1RR37 186 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 K7ESM1 405 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 TM4SF5O14894 197 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF189O75820 626 aaPredicted RBP16.55■□□□□ 0.24
CXCL1-201ENST00000395761 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
CXCL1-201ENST00000395761 AGTP01019 485 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 CD59P13987 128 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 ETS1P14921 441 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 STIP1P31948 543 aaKnown RBP16.55■□□□□ 0.24
CXCL1-201ENST00000395761 RABIFP47224 123 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 STC1P52823 247 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 GEMP55040 296 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 IL9RQ01113 521 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 FZD2Q14332 565 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 SIRPB2Q5JXA9 342 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 ARHGEF18Q6ZSZ5 1173 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 PRELID2Q8N945 189 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 GLIS1Q8NBF1 620 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 FAM174AQ8TBP5 190 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 EID2BQ96D98 161 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 RTP4Q96DX8 246 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 NUS1Q96E22 293 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 DTD2Q96FN9 168 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 ELF4Q99607 663 aaPredicted RBP16.55■□□□□ 0.24
CXCL1-201ENST00000395761 FICDQ9BVA6 458 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 ERVMER34-1Q9H9K5 563 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 CD84Q9UIB8 345 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 SHOC2Q9UQ13 582 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 OR1A2Q9Y585 309 aa16.55■□□□□ 0.24
CXCL1-201ENST00000395761 A0A1B0GTQ1 180 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PSMD11O00231 422 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PGRMC1O00264 195 aaKnown RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ANXA9O76027 345 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 IFNB1P01574 187 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 EPOP01588 193 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ITGAVP06756 1048 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF30P17039 623 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ADRA1AP35348 466 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PAFAH1B1P43034 410 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 KCNJ1P48048 391 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 SPARCL1Q14515 664 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PRPSAP1Q14558 356 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
CXCL1-201ENST00000395761 PARP6Q2NL67 630 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 ZNF542PQ5EBM4 170 aa16.54■□□□□ 0.24
CXCL1-201ENST00000395761 FAXCQ5TGI0 409 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms