RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PCDH9Q9HC56 1237 aa30.77■■■□□ 2.52
CMTM4-202ENST00000394106 A0A0J9YYE9 177 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 RASGRP1O95267 797 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 TRBC1P01850 177 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 PECAM1P16284 738 aaPredicted RBP30.76■■■□□ 2.51
CMTM4-202ENST00000394106 NR2C2P49116 596 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 BLKP51451 505 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 VAV2P52735 878 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 HK3P52790 923 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 SRP54P61011 504 aaKnown RBP30.76■■■□□ 2.51
CMTM4-202ENST00000394106 ILKQ13418 452 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 BZW1Q7L1Q6 419 aaKnown RBP30.76■■■□□ 2.51
CMTM4-202ENST00000394106 TMEM139Q8IV31 216 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 DTD2Q96FN9 168 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 RBM41Q96IZ5 413 aaKnown RBP30.76■■■□□ 2.51
CMTM4-202ENST00000394106 WDR26Q9H7D7 661 aa30.76■■■□□ 2.51
CMTM4-202ENST00000394106 MAP1BP46821 2468 aaKnown RBP30.75■■■□□ 2.51
CMTM4-202ENST00000394106 hCG_1818297A0A087WSY0 165 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 GOLGA6CA6NDK9 693 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 GOLGA6BA6NDN3 693 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 PSMD11O00231 422 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 MMP2P08253 660 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 GOLGA6DP0CG33 693 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CKMT1AP12532 417 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CTSEP14091 401 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 TSHRP16473 764 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 TGM2P21980 687 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 KIAA1024LP59773 190 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 SKOR1P84550 965 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 ADCY2Q08462 1091 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 LRRC66Q68CR7 880 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 ZCCHC8Q6NZY4 707 aaKnown RBP30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CRTC1Q6UUV9 634 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 Q6ZVL8 140 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CBARPQ8N350 705 aaPredicted RBP30.75■■■□□ 2.51
CMTM4-202ENST00000394106 EXD1Q8NHP7 514 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CALR3Q96L12 384 aaKnown RBP30.75■■■□□ 2.51
CMTM4-202ENST00000394106 TBATAQ96M53 351 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 CLPBQ9H078 707 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 KCTD5Q9NXV2 234 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 GOLGA6AQ9NYA3 693 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 LRP4O75096 1905 aa30.75■■■□□ 2.51
CMTM4-202ENST00000394106 FRYQ5TBA9 3013 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 BTNL10A8MVZ5 291 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 PRLP01236 227 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 ANXA6P08133 673 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 CELA2BP08218 269 aaPredicted RBP30.74■■■□□ 2.51
CMTM4-202ENST00000394106 TMPRSS12Q86WS5 348 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 FAM181AQ8N9Y4 354 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 P3H4Q92791 437 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 HAUS1Q96CS2 278 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 PDXPQ96GD0 296 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 LGR4Q9BXB1 951 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 EVA1BQ9NVM1 165 aa30.74■■■□□ 2.51
CMTM4-202ENST00000394106 TMEM202A6NGA9 273 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 CAPN8A6NHC0 703 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 TPP1O14773 563 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 TRIM23P36406 574 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 RPL26P61254 145 aaKnown RBP30.73■■■□□ 2.51
CMTM4-202ENST00000394106 PRKD1Q15139 912 aaPredicted RBP30.73■■■□□ 2.51
CMTM4-202ENST00000394106 HES3Q5TGS1 186 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 KCTD16Q68DU8 428 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 OR56A4Q8NGH8 313 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 TFB1MQ8WVM0 346 aaKnown RBP30.73■■■□□ 2.51
CMTM4-202ENST00000394106 RBM15Q96T37 977 aaKnown RBP eCLIP30.73■■■□□ 2.51
CMTM4-202ENST00000394106 DESI2Q9BSY9 194 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 HEMGNQ9BXL5 484 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 CD84Q9UIB8 345 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 RPL26L1Q9UNX3 145 aaKnown RBP30.73■■■□□ 2.51
CMTM4-202ENST00000394106 DOLKQ9UPQ8 538 aa30.73■■■□□ 2.51
CMTM4-202ENST00000394106 LY6G6EA0A0G2JKS1 128 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 TMEM8BA6NDV4 472 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 GOLGA6L6A8MZA4 724 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 LMO7DNF2Z398 122 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 YY2O15391 372 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 PJA2O43164 708 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 TNFP01375 233 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 JUPP14923 745 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 KELP23276 732 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 CTNNA1P35221 906 aaKnown RBP30.72■■■□□ 2.51
CMTM4-202ENST00000394106 DUSP3P51452 185 aaPredicted RBP30.72■■■□□ 2.51
CMTM4-202ENST00000394106 ELOCQ15369 112 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 RAET1GQ6H3X3 334 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 RFLNAQ6ZTI6 216 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 NT5DC3Q86UY8 548 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 ZC3H18Q86VM9 953 aaKnown RBP30.72■■■□□ 2.51
CMTM4-202ENST00000394106 FSTL5Q8N475 847 aaPredicted RBP30.72■■■□□ 2.51
CMTM4-202ENST00000394106 KIAA1524Q8TCG1 905 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 OR1E3Q8WZA6 343 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 FGF22Q9HCT0 170 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 MRPL40Q9NQ50 206 aaKnown RBP30.72■■■□□ 2.51
CMTM4-202ENST00000394106 MOSPD1Q9UJG1 213 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 U3KQA8 63 aa30.72■■■□□ 2.51
CMTM4-202ENST00000394106 HOXC4P09017 264 aaPredicted RBP30.71■■■□□ 2.51
CMTM4-202ENST00000394106 ZNF30P17039 623 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 CDKN3Q16667 212 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 KDELC2Q7Z4H8 507 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 TECPR1Q7Z6L1 1165 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 HEATR4Q86WZ0 1026 aa30.71■■■□□ 2.51
CMTM4-202ENST00000394106 ZCCHC14Q8WYQ9 949 aaKnown RBP30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms