RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 OTUB2Q96DC9 234 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 UBXN10Q96LJ8 280 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 MRPL57Q9BQC6 102 aaKnown RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 MRPL46Q9H2W6 279 aaKnown RBP22.2■■□□□ 1.14
HMGA2-203ENST00000393578 IGSF5Q9NSI5 407 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 HEY2Q9UBP5 337 aa22.2■■□□□ 1.14
HMGA2-203ENST00000393578 TMEM114B3SHH9 223 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 TRAFD1O14545 582 aaPredicted RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 STX7O15400 261 aaKnown RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 HTRA2O43464 458 aaPredicted RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 CDKN2DP55273 166 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 FUT11Q495W5 492 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 DGKKQ5KSL6 1271 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 AGAP9Q5VTM2 703 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 WDR75Q8IWA0 830 aaKnown RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 OR6K2Q8NGY2 324 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 HEXDCQ8WVB3 486 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 SORT1Q99523 831 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 LINC00597Q9H2U6 94 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 ATP13A3Q9H7F0 1226 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 POLR3BQ9NW08 1133 aaPredicted RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 XPR1Q9UBH6 696 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 MARCOQ9UEW3 520 aaPredicted RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 SLC4A1P02730 911 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 KITP10721 976 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 SRCP12931 536 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 CEBPBP17676 345 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 SKIV2L2P42285 1042 aaKnown RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 LIPMQ5VYY2 423 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 ZNF549Q6P9A3 640 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 SPATA6LQ8N4H0 392 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 OR2AP1Q8NGE2 309 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 RPL10LQ96L21 214 aaKnown RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 ECT2Q9H8V3 914 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 ZFP69BQ9UJL9 534 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 DNAJC16Q9Y2G8 782 aa22.19■■□□□ 1.14
HMGA2-203ENST00000393578 MRPS23Q9Y3D9 190 aaKnown RBP22.19■■□□□ 1.14
HMGA2-203ENST00000393578 H7C0S8 307 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 WISP3O95389 354 aaPredicted RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 LTA4HP09960 611 aaKnown RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 TYRP14679 529 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 FDXRP22570 491 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 CTSOP43234 321 aaPredicted RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 SNRPD1P62314 119 aaKnown RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 CSHL1Q14406 222 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 ASTLQ6HA08 431 aaPredicted RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 KLC3Q6P597 504 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 NAPRTQ6XQN6 538 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 CLNKQ7Z7G1 428 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 ADGRG2Q8IZP9 1017 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 MICALL1Q8N3F8 863 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 ING5Q8WYH8 240 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 SKA1Q96BD8 255 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 WWP1Q9H0M0 922 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 TNKS2Q9H2K2 1166 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 ZNF711Q9Y462 761 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 CCDC166P0CW27 439 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 ARRB2P32121 409 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 HMGCLP35914 325 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 STK19P49842 368 aaPredicted RBP22.18■■□□□ 1.14
HMGA2-203ENST00000393578 AQP5P55064 265 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 PIDD1Q9HB75 910 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 POPDC3Q9HBV1 291 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 VPS9D1Q9Y2B5 631 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 PKP3Q9Y446 797 aa22.18■■□□□ 1.14
HMGA2-203ENST00000393578 H0YHG0 523 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 SLC9A3R1O14745 358 aaPredicted RBP22.17■■□□□ 1.14
HMGA2-203ENST00000393578 ATP5HO75947 161 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 PIGNO95427 931 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 PABPC1P11940 636 aaKnown RBP22.17■■□□□ 1.14
HMGA2-203ENST00000393578 SERPINB3P29508 390 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 NCALDP61601 193 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 ZBTB16Q05516 673 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 SULT2A1Q06520 285 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 DMC1Q14565 340 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 CBX2Q14781 532 aaPredicted RBP22.17■■□□□ 1.14
HMGA2-203ENST00000393578 PTPRRQ15256 657 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 HSF5Q4G112 596 aaPredicted RBP22.17■■□□□ 1.14
HMGA2-203ENST00000393578 LY6G5CQ5SRR4 150 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 ADGRD2Q7Z7M1 963 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 GATA5Q9BWX5 397 aaPredicted RBP22.17■■□□□ 1.14
HMGA2-203ENST00000393578 GPR63Q9BZJ6 419 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 TXLNGQ9NUQ3 528 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 MARK1Q9P0L2 795 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 IL17CQ9P0M4 197 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 FKBPLQ9UIM3 349 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 SLC25A13Q9UJS0 675 aa22.17■■□□□ 1.14
HMGA2-203ENST00000393578 PFDN6O15212 129 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 UNC5CO95185 931 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 PRSS56P0CW18 603 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 SERPINA4P29622 427 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 MC4RP32245 332 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 SUOXP51687 545 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 ASPHQ12797 758 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 ACAP2Q15057 778 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 SHHQ15465 462 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 ATG14Q6ZNE5 492 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 SMG7Q92540 1137 aaKnown RBP22.16■■□□□ 1.14
HMGA2-203ENST00000393578 LPGAT1Q92604 370 aa22.16■■□□□ 1.14
HMGA2-203ENST00000393578 C19orf43Q9BQ61 176 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms