RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ZNF570Q96NI8 536 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 SHCBP1LQ9BZQ2 653 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 MFSD1Q9H3U5 465 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 ZDHHC4Q9NPG8 344 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 SPHK2Q9NRA0 654 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 GALPQ9UBC7 116 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 COPG2Q9UBF2 871 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 ARL2BPQ9Y2Y0 163 aa14.99□□□□□ -0.01
MKS1-202ENST00000393119 MTCL1Q9Y4B5 1905 aaKnown RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 XYLBO75191 536 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 ANP32DO95626 131 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 CYBBP04839 570 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RB1P06400 928 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RAB10P61026 200 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 CSHL1Q14406 222 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 NAA25Q14CX7 972 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 ZNF783Q6ZMS7 281 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 LYSMD3Q7Z3D4 306 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 ANKS4BQ8N8V4 417 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 CHST14Q8NCH0 376 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 AGAP11Q8TF27 550 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 GPR78Q96P69 363 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RETREG1Q9H6L5 497 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 SLC24A3Q9HC58 644 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 TLK1Q9UKI8 766 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 TRIM33Q9UPN9 1127 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RWDD3Q9Y3V2 267 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 SLC7A4O43246 635 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 FZD6O60353 706 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RPP40O75818 363 aaKnown RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 PAPSS2O95340 614 aaPredicted RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 LEPRP48357 1165 aaKnown RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 EPHB1P54762 984 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 POM121L1PQ3SYA9 428 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RARS2Q5T160 578 aaKnown RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 HECTD2Q5U5R9 776 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 RETSATQ6NUM9 610 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 KYAT3Q6YP21 454 aaKnown RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 RFLNAQ6ZTI6 216 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 TSPAN33Q86UF1 283 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 FSTL5Q8N475 847 aaPredicted RBP14.98□□□□□ -0.01
MKS1-202ENST00000393119 PAF1Q8N7H5 531 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 OR4L1Q8NH43 312 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 PIH1D2Q8WWB5 315 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 SCYL1Q96KG9 808 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 FAM167BQ9BTA0 163 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 NMRAL1Q9HBL8 299 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 ZNF510Q9Y2H8 683 aa14.98□□□□□ -0.01
MKS1-202ENST00000393119 TRAFD1O14545 582 aaPredicted RBP14.97□□□□□ -0.01
MKS1-202ENST00000393119 LIN7AO14910 233 aaPredicted RBP14.97□□□□□ -0.01
MKS1-202ENST00000393119 SMNDC1O75940 238 aaKnown RBP eCLIP14.97□□□□□ -0.01
MKS1-202ENST00000393119 GLP2RO95838 553 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 CPA3P15088 417 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 ARSAP15289 507 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 STMN1P16949 149 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 KCNC1P48547 511 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 CCNG1P51959 295 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 NCALDP61601 193 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 OCRLQ01968 901 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 NSUN2Q08J23 767 aaKnown RBP eCLIP14.97□□□□□ -0.01
MKS1-202ENST00000393119 Q6ZVU0 165 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 ADIPOR2Q86V24 386 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 PPP1R14CQ8TAE6 165 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 HEXDCQ8WVB3 486 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 ABCG8Q9H221 673 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 PNPOQ9NVS9 261 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 DNAH14Q0VDD8 3507 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 PENKP01210 267 aaPredicted RBP14.97□□□□□ -0.01
MKS1-202ENST00000393119 MPOP05164 745 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 FMO4P31512 558 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 ACVR1Q04771 509 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 STX3Q13277 289 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 PEX6Q13608 980 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 MPP7Q5T2T1 576 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 TTC30BQ8N4P2 665 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 MYLK2Q9H1R3 596 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 NLE1Q9NVX2 485 aaPredicted RBP14.97□□□□□ -0.01
MKS1-202ENST00000393119 KLHL14Q9P2G3 628 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 XPR1Q9UBH6 696 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 L3MBTL1Q9Y468 752 aa14.97□□□□□ -0.01
MKS1-202ENST00000393119 UBA6A0AVT1 1052 aaPredicted RBP14.96□□□□□ -0.01
MKS1-202ENST00000393119 TNRC18O15417 2968 aaPredicted RBP14.96□□□□□ -0.01
MKS1-202ENST00000393119 PGLSO95336 258 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 CLDN7O95471 211 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 DLDP09622 509 aaKnown RBP14.96□□□□□ -0.01
MKS1-202ENST00000393119 HNRNPA1P09651 372 aaKnown RBP eCLIP14.96□□□□□ -0.01
MKS1-202ENST00000393119 NQO1P15559 274 aaKnown RBP14.96□□□□□ -0.01
MKS1-202ENST00000393119 KCNA5P22460 613 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 TAF1AQ15573 450 aaPredicted RBP14.96□□□□□ -0.01
MKS1-202ENST00000393119 FAM78AQ5JUQ0 283 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 DPY19L3Q6ZPD9 716 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 STYXQ8WUJ0 223 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 MYO19Q96H55 970 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 EBF3Q9H4W6 596 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 CATSPERZQ9NTU4 200 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 ACOT9Q9Y305 439 aa14.96□□□□□ -0.01
MKS1-202ENST00000393119 ANKRD33BA6NCL7 494 aa14.96□□□□□ -0.02
MKS1-202ENST00000393119 CCDC85CA6NKD9 419 aa14.96□□□□□ -0.02
MKS1-202ENST00000393119 IQCF5A8MTL0 148 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms