RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SEPT3Q9UH03 358 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 CIDEBQ9UHD4 219 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 DOCK1Q14185 1865 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 A0A0J9YVX5 310 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TRAFD1O14545 582 aaPredicted RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 CD3EAPO15446 510 aaKnown RBP10.56□□□□□ -0.72
CALD1-203ENST00000393118 FAM58BPP0C7Q3 252 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ITGADQ13349 1161 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 PLD1Q13393 1074 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 STEAP4Q687X5 459 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 PHC3Q8NDX5 983 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 OR6K2Q8NGY2 324 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TMEM169Q96HH4 297 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 BTN2A3PQ96KV6 586 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 HAPLN3Q96S86 360 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 RTKNQ9BST9 563 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 OSBPL2Q9H1P3 480 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 TRAF6Q9Y4K3 522 aa10.56□□□□□ -0.72
CALD1-203ENST00000393118 ZCWPW2A0A1B0GU75 182 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 HMX2A2RU54 273 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 GABRDO14764 452 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CBFA2T3O75081 653 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CDH3P22223 829 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 MAGEA6P43360 314 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ARPC4P59998 168 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 NFYCQ13952 458 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 HNRNPDQ14103 355 aaKnown RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 GPR141Q7Z602 305 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CAPSLQ8WWF8 208 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CYGBQ8WWM9 190 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ESAMQ96AP7 390 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 GPR22Q99680 433 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CCDC106Q9BWC9 280 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 DAPK2Q9UIK4 370 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SH3BP5O60239 455 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SORBS2O94875 1100 aaKnown RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 TNFAIP8O95379 198 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 FYNP06241 537 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 RHOQP17081 205 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PSMC3P17980 439 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 AOC1P19801 751 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ITGAXP20702 1163 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CCND3P30281 292 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 OR1D2P34982 312 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 MLLT6P55198 1093 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 MCCD1P59942 119 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 INPP5AQ14642 412 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ANKS6Q68DC2 871 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 LINGO4Q6UY18 593 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 AMIGO2Q86SJ2 522 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PIM3Q86V86 326 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ZNF786Q8N393 782 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PARVBQ9HBI1 364 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 EMCNQ9ULC0 261 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ARL5AQ9Y689 179 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 H7C4K7 107 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SNNO75324 88 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 ALDH1A2O94788 518 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ESRRBO95718 433 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 LINC00032P0C843 101 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 VCLP18206 1134 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ACVRL1P37023 503 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 NUP107P57740 925 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 FOLH1Q04609 750 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 LSAMPQ13449 338 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 ALFQ53S48 1182 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 FBXL22Q6P050 247 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 OR4K2Q8NGD2 314 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 OR13C4Q8NGS5 318 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SEPT8Q92599 483 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CCDC138Q96M89 665 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SGIP1Q9BQI5 828 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 DNAJB4Q9UDY4 337 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 CRLS1Q9UJA2 301 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PCDHGC4Q9Y5F7 938 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 COL11A1P12107 1806 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 PENKP01210 267 aaPredicted RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 ZNF24P17028 368 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 PITRM1Q5JRX3 1037 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 METTL21CQ5VZV1 264 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 LRRC49Q8IUZ0 686 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 OR4L1Q8NH43 312 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 MAPK15Q8TD08 544 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 TRIB2Q92519 343 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 KATNBL1Q9H079 304 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 LIN28AQ9H9Z2 209 aaKnown RBP10.55□□□□□ -0.72
CALD1-203ENST00000393118 VPS45Q9NRW7 570 aa10.55□□□□□ -0.72
CALD1-203ENST00000393118 SF3B1O75533 1304 aaKnown RBP eCLIP10.54□□□□□ -0.72
CALD1-203ENST00000393118 ZNF839A8K0R7 811 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 SNRPB2P08579 225 aaKnown RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 HAPLN1P10915 354 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 UQCRBP14927 111 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 PRSS55Q6UWB4 352 aaPredicted RBP10.54□□□□□ -0.72
CALD1-203ENST00000393118 ZBTB49Q6ZSB9 765 aa10.54□□□□□ -0.72
CALD1-203ENST00000393118 CEP97Q8IW35 865 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms