RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FAM46DQ8NEK8 389 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 GPR156Q8NFN8 814 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ATL2Q8NHH9 583 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 TEKT4Q8WW24 435 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 SLC39A7Q92504 469 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 NT5MQ9NPB1 228 aa16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ATXN7L1Q9ULK2 861 aaPredicted RBP16.61■□□□□ 0.25
PTPRK-208ENST00000392449 ARHGEF17Q96PE2 2063 aaPredicted RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 D6RAR5 112 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 ATXN7O15265 892 aaPredicted RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 NOBOXO60393 691 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 SOCS5O75159 536 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 TNFSF15O95150 251 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 HGFP14210 728 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 VIPR1P32241 457 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 ZBED6P86452 979 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 IHHQ14623 411 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 ARHGAP40Q5TG30 622 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 HEATR4Q86WZ0 1026 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 GFM1Q96RP9 751 aaKnown RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 IFNKQ9P0W0 207 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 IP6K2Q9UHH9 426 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 CAPN11Q9UMQ6 739 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 BZW2Q9Y6E2 419 aaKnown RBP16.6■□□□□ 0.25
PTPRK-208ENST00000392449 RNF215Q9Y6U7 377 aa16.6■□□□□ 0.25
PTPRK-208ENST00000392449 UNC13CQ8NB66 2214 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CCDC187A0A096LP49 1063 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 PRSS38A1L453 326 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 GOLGA6CA6NDK9 693 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 GOLGA6BA6NDN3 693 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CDRT15L2A8MXV6 281 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 PGLSO95336 258 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 PDHA1P08559 390 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 GOLGA6DP0CG33 693 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CCDC122Q5T0U0 273 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 FAM182AQ5T1J6 154 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 MARC1Q5VT66 337 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
PTPRK-208ENST00000392449 IGF2-ASQ6U949 168 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 Q6ZVL8 140 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CCNJLQ8IV13 435 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 WDR36Q8NI36 951 aaKnown RBP16.59■□□□□ 0.25
PTPRK-208ENST00000392449 DTD2Q96FN9 168 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 PACSIN1Q9BY11 444 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 LRRN3Q9H3W5 708 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 DPEP2Q9H4A9 486 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
PTPRK-208ENST00000392449 GOLGA6AQ9NYA3 693 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 CD84Q9UIB8 345 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 PCDHGA8Q9Y5G5 932 aa16.59■□□□□ 0.25
PTPRK-208ENST00000392449 MYCLP1P12525 358 aaPredicted RBP16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SERPINB6P35237 376 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 HSPA9P38646 679 aaKnown RBP16.58■□□□□ 0.24
PTPRK-208ENST00000392449 POLD2P49005 469 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 ARSEP51690 589 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 MAZP56270 477 aaKnown RBP16.58■□□□□ 0.24
PTPRK-208ENST00000392449 DPYSL3Q14195 570 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 NCBP2-AS2Q69YL0 99 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SPECC1LQ69YQ0 1117 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 TMPRSS9Q7Z410 1059 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 WDR48Q8TAF3 677 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SEMA3CQ99985 751 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SPATS2LQ9NUQ6 558 aaKnown RBP16.58■□□□□ 0.24
PTPRK-208ENST00000392449 PHTF1Q9UMS5 762 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 NENFQ9UMX5 172 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 ST14Q9Y5Y6 855 aa16.58■□□□□ 0.24
PTPRK-208ENST00000392449 SCN8AQ9UQD0 1980 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 MYO1FO00160 1098 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TNFRSF10CO14798 259 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 CEACAM5P06731 702 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 HOXC4P09017 264 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 KELP23276 732 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 AK4P27144 223 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 CASP14P31944 242 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TMPRSS3P57727 454 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TAS2R40P59535 323 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TPM4P67936 248 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 SKOR1P84550 965 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 DSC2Q02487 901 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 ITKQ08881 620 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 C14orf28Q4W4Y0 310 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 CERCAMQ5T4B2 595 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 ARMC12Q5T9G4 340 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 BROXQ5VW32 411 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 RAET1GQ6H3X3 334 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 OGFOD3Q6PK18 319 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 DOK6Q6PKX4 331 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 NRROSQ86YC3 692 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 CBARPQ8N350 705 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 BBS5Q8N3I7 341 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 ZNF564Q8TBZ8 553 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 NSMCE1Q8WV22 266 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 PIH1D2Q8WWB5 315 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 GRAMD1AQ96CP6 724 aa16.57■□□□□ 0.24
PTPRK-208ENST00000392449 LIN37Q96GY3 246 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-208ENST00000392449 TEX101Q9BY14 249 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms