RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 TOR4AQ9NXH8 423 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 NCKIPSDQ9NZQ3 722 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SEPT10Q9P0V9 454 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 CHKBQ9Y259 395 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 NCOR2Q9Y618 2525 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
GGPS1-203ENST00000391855 FAM221BA6H8Z2 402 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 TPP1O14773 563 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 AQP9O43315 295 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 CTPS1P17812 591 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 GM2AP17900 193 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 PTPN3P26045 913 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 HNF1BP35680 557 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 TRIM23P36406 574 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 ACADVLP49748 655 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 DUSP3P51452 185 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-203ENST00000391855 DPTQ07507 201 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 NOMO1Q15155 1222 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 TPRG1LQ5T0D9 272 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 FAXCQ5TGI0 409 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 LRRC66Q68CR7 880 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 ZCCHC8Q6NZY4 707 aaKnown RBP12.68□□□□□ -0.38
GGPS1-203ENST00000391855 SLCO6A1Q86UG4 719 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 NLRP8Q86W28 1048 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 NRSN1Q8IZ57 195 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 CBARPQ8N350 705 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-203ENST00000391855 GALNT15Q8N3T1 639 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 FAM181AQ8N9Y4 354 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 LPCAT1Q8NF37 534 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 LRRN4Q8WUT4 740 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 TEKT5Q96M29 485 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 SRPK1Q96SB4 655 aaKnown RBP12.68□□□□□ -0.38
GGPS1-203ENST00000391855 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 OSBPL8Q9BZF1 889 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 WDR26Q9H7D7 661 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 GLOD4Q9HC38 313 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 PHPT1Q9NRX4 125 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-203ENST00000391855 KLQ9UEF7 1012 aa12.68□□□□□ -0.38
GGPS1-203ENST00000391855 GOLGA6L9A6NEM1 432 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 A8MX80 341 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TRIM38O00635 465 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TNFRSF10CO14798 259 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 HYAL3O43820 417 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TJP3O95049 919 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 PRLP01236 227 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 MMP2P08253 660 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ALPIP09923 528 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 GIMD1P0DJR0 217 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 MYCLP1P12525 358 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ACP1P24666 158 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TNNT3P45378 269 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 STC1P52823 247 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 DAB2P98082 770 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ELOCQ15369 112 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ZNF542PQ5EBM4 170 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 CCDC70Q6NSX1 233 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 PNCKQ6P2M8 343 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 HSD11B1LQ7Z5J1 315 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 CDKL3Q8IVW4 592 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 CHCHD4Q8N4Q1 142 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 GLMNQ92990 594 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TADA1Q96BN2 335 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 HAUS1Q96CS2 278 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 MLPHQ9BV36 600 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 LRRC61Q9BV99 259 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 KLHL8Q9P2G9 620 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 SAE1Q9UBE0 346 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-203ENST00000391855 TRHDEQ9UKU6 1024 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 MSRB2Q9Y3D2 182 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 DGKBQ9Y6T7 804 aa12.67□□□□□ -0.38
GGPS1-203ENST00000391855 RGSL1A5PLK6 1076 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ANKRD66B4E2M5 251 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 K7ESM1 405 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 FFAR2O15552 330 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CCDC175P0C221 793 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ETV3P41162 512 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 HK3P52790 923 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 SRP54P61011 504 aaKnown RBP12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CDK18Q07002 472 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 IHHQ14623 411 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 LLGL1Q15334 1064 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 QPCTQ16769 361 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ALG11Q2TAA5 492 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 PRRT3Q5FWE3 981 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 RAET1GQ6H3X3 334 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 LVRNQ6Q4G3 990 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 CRTC1Q6UUV9 634 aa12.66□□□□□ -0.38
GGPS1-203ENST00000391855 ENPP7Q6UWV6 458 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms