RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 NR5A2O00482 541 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 RAMP2O60895 175 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 HADHAP40939 763 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 RNF111Q6ZNA4 994 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 AMIGO2Q86SJ2 522 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 LZTR1Q8N653 840 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 NAT14Q8WUY8 206 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 VWA7Q9Y334 891 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ASB3Q9Y575 518 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 RAD54BQ9Y620 910 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 NLRC5Q86WI3 1866 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 FGF10O15520 208 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ZNF24P17028 368 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ARSDP51689 593 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 MTTPP55157 894 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 HECTD2Q5U5R9 776 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ANKRD33Q7Z3H0 272 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 PIWIL4Q7Z3Z4 852 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 NUP93Q8N1F7 819 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 RTL3Q8N8U3 475 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 CALML6Q8TD86 181 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 ATP6V1E2Q96A05 226 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 EML4Q9HC35 981 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 PTGDR2Q9Y5Y4 395 aa12.11□□□□□ -0.47
CAPRIN1-202ENST00000389645 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PSMD12O00232 456 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 GIPC1O14908 333 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 VNN2O95498 520 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 LTA4HP09960 611 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ACRP10323 421 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 IRF1P10914 325 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 UQCRBP14927 111 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MS4A2Q01362 244 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 CBX3Q13185 183 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 CEACAM7Q14002 265 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 LBRQ14739 615 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 NFE2Q16621 373 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 METTL21CQ5VZV1 264 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ARHGAP18Q8N392 663 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 IRGQQ8WZA9 623 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 TUBGCP3Q96CW5 907 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PRPF18Q99633 342 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 TRIM8Q9BZR9 551 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 Q9H521 79 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MARCH2Q9P0N8 246 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 STK39Q9UEW8 545 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ARL5AQ9Y689 179 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 SYN3O14994 580 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ACVRL1P37023 503 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PSME3P61289 254 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 CDK18Q07002 472 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MRPL58Q14197 206 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 BRMS1LQ5PSV4 323 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 CLEC14AQ86T13 490 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 OR13C4Q8NGS5 318 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ANKRD49Q8WVL7 239 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 DCUN1D1Q96GG9 259 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 SLC45A3Q96JT2 553 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MID1IP1Q9NPA3 183 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 VTI1BQ9UEU0 232 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 LRRC14BA6NHZ5 514 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 AKAP10O43572 662 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 IPO13O94829 963 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 SEC24DO94855 1032 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 COL6A1P12109 1028 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 TAF10Q12962 218 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PIK3R6Q5UE93 754 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 RAB44Q7Z6P3 723 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ZBTB46Q86UZ6 589 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 LCA5Q86VQ0 697 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 PTGR2Q8N8N7 351 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 ZYG11BQ9C0D3 744 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 OSBPL2Q9H1P3 480 aa12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 SEMA4BQ9NPR2 832 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MARCH4Q9P2E8 410 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-202ENST00000389645 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 A8MT66 165 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 SLCO1B7G3V0H7 640 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 BNIP3LO60238 219 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 RHOBTB1O94844 696 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 SBK3P0C264 359 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 ARNTP27540 789 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 FUT11Q495W5 492 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 OR52E8Q6IFG1 317 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 SETD3Q86TU7 594 aaPredicted RBP12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
CAPRIN1-202ENST00000389645 TRPC4APQ8TEL6 797 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms