RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NRG1Q02297 640 aaPredicted RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 RALGDSQ12967 914 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 DYNC1I2Q13409 638 aaKnown RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 MAPRE2Q15555 327 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 CLEC6AQ6EIG7 209 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TFAP2DQ7Z6R9 452 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 SPATA2LQ8IUW3 424 aaPredicted RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 AFAP1L2Q8N4X5 818 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 METTL25Q8N6Q8 603 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TSPAN17Q96FV3 270 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 SLC2A11Q9BYW1 496 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 ZNF696Q9H7X3 374 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TRAF6Q9Y4K3 522 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 ZNF623O75123 536 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 MT-CO1P00395 513 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TSPAN8P19075 237 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 YWHAQP27348 245 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 RENBPP51606 427 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TSPY1Q01534 308 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 DSC2Q02487 901 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 ITKQ08881 620 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 GPR158Q5T848 1215 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 TMEM199Q8N511 208 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 SEPT8Q92599 483 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 LPGAT1Q92604 370 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 DGCR14Q96DF8 476 aaKnown RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 HMCESQ96FZ2 354 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 ALG9Q9H6U8 611 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 MARCH4Q9P2E8 410 aaPredicted RBP13.88□□□□□ -0.19
NEK4-202ENST00000383721 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
NEK4-202ENST00000383721 A0A1B0GVG6 124 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 MROH6A6NGR9 719 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 OR51F1A6NGY5 319 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 VILLO15195 856 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 GPC4O75487 556 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 PAPSS2O95340 614 aaPredicted RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 TNFAIP8O95379 198 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 S1PR4O95977 384 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SNRPB2P08579 225 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 IMPDH1P20839 514 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 HSPA13P48723 471 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 RHDQ02161 417 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SLC5A9Q2M3M2 681 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 IYDQ6PHW0 289 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 ISCA2Q86U28 154 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 PIM3Q86V86 326 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 ZNF683Q8IZ20 524 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 UMODL1-AS1Q8N2C9 162 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 HDAC10Q969S8 669 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SLCO4A1Q96BD0 722 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 ZCWPW1Q9H0M4 648 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SEMA6AQ9H2E6 1030 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 FBRSL1Q9HCM7 1045 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 MRGBPQ9NV56 204 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 CD300AQ9UGN4 299 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 CNOT11Q9UKZ1 510 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 LTBP2Q14767 1821 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 ATP6AP2A0A1C7CYW4 349 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 C7orf72A4D263 438 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SLC7A4O43246 635 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 ATP6AP2O75787 350 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SPATA31D3P0C874 917 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 TUSC3Q13454 348 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 NADK2Q4G0N4 442 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 MARC1Q5VT66 337 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 ARMC3Q5W041 872 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SPATA31D4Q6ZUB0 917 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 LARP4Q71RC2 724 aaKnown RBP eCLIP13.87□□□□□ -0.19
NEK4-202ENST00000383721 OTOP2Q7RTS6 562 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 TMCO2Q7Z6W1 182 aaPredicted RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 GALNT7Q86SF2 657 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 LRTOMTQ8WZ04 291 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 TOP1MTQ969P6 601 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 C1orf74Q96LT6 269 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 SERPINB11Q96P15 392 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 PRPF18Q99633 342 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 SPAG4Q9NPE6 437 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 MRPL40Q9NQ50 206 aaKnown RBP13.87□□□□□ -0.19
NEK4-202ENST00000383721 VPS45Q9NRW7 570 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
NEK4-202ENST00000383721 MRASO14807 208 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 CNTN5O94779 1100 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 SUPT7LO94864 414 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 CSPG5O95196 566 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 FAM58BPP0C7Q3 252 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 ATP6V1B1P15313 513 aa13.86□□□□□ -0.19
NEK4-202ENST00000383721 USP41Q3LFD5 358 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms