RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 WDR5P61964 334 aaKnown RBP23.12■■□□□ 1.29
VPS16-201ENST00000380443 C16orf59Q7L2K0 433 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 METTL3Q86U44 580 aaKnown RBP23.12■■□□□ 1.29
VPS16-201ENST00000380443 SPATA6LQ8N4H0 392 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 KDM1BQ8NB78 822 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 RHEBL1Q8TAI7 183 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 C19orf43Q9BQ61 176 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 RTKNQ9BST9 563 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 SUDS3Q9H7L9 328 aaPredicted RBP23.12■■□□□ 1.29
VPS16-201ENST00000380443 IL21Q9HBE4 155 aa23.12■■□□□ 1.29
VPS16-201ENST00000380443 CXorf51AA0A1B0GTR3 108 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 ANKRD66B4E2M5 251 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 SMIM24O75264 130 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 ENTPD5O75356 428 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 TMCC1O94876 653 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 HDCP19113 662 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 IMPDH1P20839 514 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 NAA20P61599 178 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 DEFB103AP81534 67 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 MFN1Q8IWA4 741 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 ULK2Q8IYT8 1036 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 CARNMT1Q8N4J0 409 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 DCAF4L2Q8NA75 395 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 STMN2Q93045 179 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 WBP2Q969T9 261 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 L3HYPDHQ96EM0 354 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 FAM161BQ96MY7 647 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 FEM1AQ9BSK4 669 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 STOML1Q9UBI4 398 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 ARHGAP26Q9UNA1 814 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 OR51B4Q9Y5P0 310 aa23.11■■□□□ 1.29
VPS16-201ENST00000380443 TEX28O15482 410 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 DCXO43602 365 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 GREM1O60565 184 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 COX4I1P13073 169 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 HERC3Q15034 1050 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 MPP7Q5T2T1 576 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 ZNF549Q6P9A3 640 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 ISCA2Q86U28 154 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 RNF135Q8IUD6 432 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 CPXM2Q8N436 756 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 ANKRD49Q8WVL7 239 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 MRPS31Q92665 395 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 MAELQ96JY0 434 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 OR52B2Q96RD2 323 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 CCDC68Q9H2F9 335 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 TFB2MQ9H5Q4 396 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 CRYL1Q9Y2S2 319 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 SPO11Q9Y5K1 396 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 ACTL7AQ9Y615 435 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 COMMD10Q9Y6G5 202 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 PLXNA4Q9HCM2 1894 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 E9PBE3 544 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 CCL22O00626 93 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 KLHL41O60662 606 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 AP1S1P61966 158 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 KPNB1Q14974 876 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 LSM12Q3MHD2 195 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 KHDC1Q4VXA5 237 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 AARS2Q5JTZ9 985 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 LDB1Q86U70 411 aaPredicted RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 OR4K2Q8NGD2 314 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 THTPAQ9BU02 230 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 ZNF334Q9HCZ1 680 aaPredicted RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 SMPD4Q9NXE4 827 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 DNMT3BQ9UBC3 853 aaKnown RBP23.1■■□□□ 1.29
VPS16-201ENST00000380443 LHX3Q9UBR4 397 aa23.1■■□□□ 1.29
VPS16-201ENST00000380443 RGSL1A5PLK6 1076 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 H7C0S8 307 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 NDUFS3O75489 264 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 CD160O95971 181 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 CTSAP10619 480 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 CD1DP15813 335 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 MAPK8P45983 427 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 ATP6V0D1P61421 351 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 SLC7A9P82251 487 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 GPR158Q5T848 1215 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 TMEM207Q6UWW9 146 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 CCDC149Q6ZUS6 474 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 HTR3DQ70Z44 454 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.09■■□□□ 1.29
VPS16-201ENST00000380443 TMEM199Q8N511 208 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 LPCAT1Q8NF37 534 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 FBXO27Q8NI29 283 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 RP9Q8TA86 221 aaKnown RBP23.09■■□□□ 1.29
VPS16-201ENST00000380443 ACTRT2Q8TDY3 377 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 ADAMTS19Q8TE59 1207 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 SGF29Q96ES7 293 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 TAS2R13Q9NYV9 303 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 NKX1-2Q9UD57 310 aaPredicted RBP23.09■■□□□ 1.29
VPS16-201ENST00000380443 VPS28Q9UK41 221 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 CPQQ9Y646 472 aa23.09■■□□□ 1.29
VPS16-201ENST00000380443 PPARGP37231 505 aaPredicted RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 TTPAP49638 278 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 GTF2A1P52655 376 aaPredicted RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 RPL26P61254 145 aaKnown RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 PDAP1Q13442 181 aaKnown RBP23.08■■□□□ 1.29
VPS16-201ENST00000380443 ACSBG2Q5FVE4 666 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 RETSATQ6NUM9 610 aa23.08■■□□□ 1.29
VPS16-201ENST00000380443 FAM117BQ6P1L5 589 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms