RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 PIH1D2Q8WWB5 315 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 ING5Q8WYH8 240 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 UBXN10Q96LJ8 280 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 GATA5Q9BWX5 397 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 BBS2Q9BXC9 721 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 BPIFA1Q9NP55 256 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 PNPOQ9NVS9 261 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 POLR3BQ9NW08 1133 aaPredicted RBP19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 HACD3Q9P035 362 aa19.86■□□□□ 0.77
PDLIM5-205ENST00000380180 TRAFD1O14545 582 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 UNC5CO95185 931 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 PIGNO95427 931 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 PENKP01210 267 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 CTPS1P17812 591 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 CSNK1DP48730 415 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 BCL2L1Q07817 233 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 GPM6BQ13491 265 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 ZNF77Q15935 545 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 FAM83EQ2M2I3 478 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 FUT11Q495W5 492 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 LIPMQ5VYY2 423 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 TMEM207Q6UWW9 146 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 ANKRD49Q8WVL7 239 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 SCG3Q8WXD2 468 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 IRF7Q92985 503 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 ZNF707Q96C28 371 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 MOCOSQ96EN8 888 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 MYO19Q96H55 970 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 MRPL57Q9BQC6 102 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 MRPL46Q9H2W6 279 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 ZDHHC7Q9NXF8 308 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 SCN8AQ9UQD0 1980 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 STX7O15400 261 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 DLX3O60479 287 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 H2AFYO75367 372 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 WISP3O95389 354 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 LTA4HP09960 611 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 SRCP12931 536 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 GRIA4P48058 902 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 ILF2Q12905 390 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 SPDYAQ5MJ70 313 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 AGAP9Q5VTM2 703 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 WWP1Q9H0M0 922 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 MAGEE1Q9HCI5 957 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 SPHK2Q9NRA0 654 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 INTS10Q9NVR2 710 aaKnown RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 FKBPLQ9UIM3 349 aa19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 CORO1CQ9ULV4 474 aaPredicted RBP19.85■□□□□ 0.77
PDLIM5-205ENST00000380180 C2orf16Q68DN1 1984 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 NUP210Q8TEM1 1887 aaPredicted RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 TMEM114B3SHH9 223 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 HSPA4LO95757 839 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 ALPIP09923 528 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 T-ENOLP0DO92 83 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 BMP1P13497 986 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 CEBPBP17676 345 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 FDXRP22570 491 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 SKIV2L2P42285 1042 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 CDKN1CP49918 316 aaPredicted RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 KPNA2P52292 529 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 TIAL1Q01085 375 aaKnown RBP eCLIP19.84■□□□□ 0.774e-8■■■■□ 22.5
PDLIM5-205ENST00000380180 CTC1Q2NKJ3 1217 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 PDE12Q6L8Q7 609 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 ALYREFQ86V81 257 aaKnown RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 PIM3Q86V86 326 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 EID2BQ96D98 161 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 PRR11Q96HE9 360 aaPredicted RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 TLE6Q9H808 572 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 ACSS2Q9NR19 701 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 TBC1D14Q9P2M4 693 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 TRIM33Q9UPN9 1127 aa19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 MTF2Q9Y483 593 aaPredicted RBP19.84■□□□□ 0.77
PDLIM5-205ENST00000380180 HTRA2O43464 458 aaPredicted RBP19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 IGSF6O95976 241 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 TARSP26639 723 aaKnown RBP19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 MC4RP32245 332 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 MAPK8P45983 427 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 PRKAA2P54646 552 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 LY6G5CQ5SRR4 150 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 ADGRD2Q7Z7M1 963 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 ADGRG2Q8IZP9 1017 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 RYBPQ8N488 228 aaPredicted RBP19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 OR2AP1Q8NGE2 309 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 SGF29Q96ES7 293 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 EBF4Q9BQW3 602 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 SIKE1Q9BRV8 207 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 GPR63Q9BZJ6 419 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 TXLNGQ9NUQ3 528 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 DPP7Q9UHL4 492 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 HAO1Q9UJM8 370 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 FNDC3AQ9Y2H6 1198 aaKnown RBP19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 ZNF711Q9Y462 761 aa19.83■□□□□ 0.77
PDLIM5-205ENST00000380180 MYO9BQ13459 2157 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 CXorf51AA0A1B0GTR3 108 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 UBA6A0AVT1 1052 aaPredicted RBP19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 ZNF197O14709 1029 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 ATP5HO75947 161 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 TYRP14679 529 aa19.83■□□□□ 0.76
PDLIM5-205ENST00000380180 NAGLUP54802 743 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms