RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 MACC1Q6ZN28 852 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PEX26Q7Z412 305 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 MAP7D3Q8IWC1 876 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ARHGAP12Q8IWW6 846 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 TP53INP2Q8IXH6 220 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 NPWQ8N729 165 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 NETO2Q8NC67 525 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ALG3Q92685 438 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 CENPTQ96BT3 561 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 CELF6Q96J87 481 aaKnown RBP12.25□□□□□ -0.45
LSM2-208ENST00000375661 RNF157Q96PX1 679 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 SPON2Q9BUD6 331 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 OSBPL1AQ9BXW6 950 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 SLC39A8Q9C0K1 460 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 STRADBQ9C0K7 418 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 MAGEH1Q9H213 219 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 ZDHHC6Q9H6R6 413 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 LRRC19Q9H756 370 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 IL17BQ9UHF5 180 aa12.25□□□□□ -0.45
LSM2-208ENST00000375661 PACSIN2Q9UNF0 486 aaPredicted RBP12.25□□□□□ -0.45
LSM2-208ENST00000375661 C16orf96A6NNT2 1141 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 ZNF487B1APH4 448 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 RASA4BC9J798 803 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 MAST4O15021 2626 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 YY2O15391 372 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 RASA4O43374 803 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 RAMP2O60895 175 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 SLC5A2P31639 672 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 ABL2P42684 1182 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 CDKN2BP42772 138 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 DNA2P51530 1060 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 YBEYP58557 167 aaPredicted RBP12.24□□□□□ -0.45
LSM2-208ENST00000375661 PPARDQ03181 441 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 NFATC3Q12968 1075 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 POLD3Q15054 466 aaPredicted RBP12.24□□□□□ -0.45
LSM2-208ENST00000375661 TPRG1LQ5T0D9 272 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 NCBP2-AS2Q69YL0 99 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 CRTC1Q6UUV9 634 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 SPOCD1Q6ZMY3 1216 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 USP53Q70EK8 1073 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 VSIG1Q86XK7 387 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 RCOR2Q8IZ40 523 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 RBFAQ8N0V3 343 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 FBXO39Q8N4B4 442 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 ARL10Q8N8L6 244 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 OR6C4Q8NGE1 309 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 EXD1Q8NHP7 514 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 SCG3Q8WXD2 468 aaKnown RBP12.24□□□□□ -0.45
LSM2-208ENST00000375661 ARHGEF2Q92974 986 aaKnown RBP12.24□□□□□ -0.45
LSM2-208ENST00000375661 SGF29Q96ES7 293 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 HES6Q96HZ4 224 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 SEMA3CQ99985 751 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 LRRC61Q9BV99 259 aa12.24□□□□□ -0.45
LSM2-208ENST00000375661 FCF1Q9Y324 198 aaKnown RBP12.24□□□□□ -0.45
LSM2-208ENST00000375661 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.24□□□□□ -0.45
LSM2-208ENST00000375661 CCDC66A2RUB6 948 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 PMS2P1A4D2B8 440 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 MIF4GDA9UHW6 222 aaKnown RBP12.23□□□□□ -0.45
LSM2-208ENST00000375661 PYCARD-AS1I3L0S3 204 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 AREL1O15033 823 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 NVLO15381 856 aaKnown RBP12.23□□□□□ -0.45
LSM2-208ENST00000375661 EFSO43281 561 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TM7SF2O76062 418 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
LSM2-208ENST00000375661 CD160O95971 181 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 GSRP00390 522 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ALPIP09923 528 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 LIPCP11150 499 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 KRT10P13645 584 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TSHRP16473 764 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 CCKBRP32239 447 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 IGFALSP35858 605 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 NDST2P52849 883 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 RWDD2BP57060 319 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 SNRPD1P62314 119 aaKnown RBP12.23□□□□□ -0.45
LSM2-208ENST00000375661 ADCY2Q08462 1091 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 C1orf61Q13536 156 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 PAFAH1B3Q15102 231 aaKnown RBP12.23□□□□□ -0.45
LSM2-208ENST00000375661 LLGL1Q15334 1064 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ELOCQ15369 112 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 LINC00303Q3SY05 128 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 FAXCQ5TGI0 409 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 MEI1Q5TIA1 1274 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 SLC9A4Q6AI14 798 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TMCO3Q6UWJ1 677 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ATG14Q6ZNE5 492 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 RAB11FIP2Q7L804 512 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 PLD5Q8N7P1 536 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 EXD3Q8N9H8 876 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 OR2AP1Q8NGE2 309 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TMEM159Q96B96 161 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 HMCESQ96FZ2 354 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TMEM74Q96NL1 305 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ALS2CR12Q96Q35 445 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 ARHGAP9Q9BRR9 750 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 HERPUD2Q9BSE4 406 aa12.23□□□□□ -0.45
LSM2-208ENST00000375661 TCEAL2Q9H3H9 227 aaPredicted RBP12.23□□□□□ -0.45
LSM2-208ENST00000375661 STARD5Q9NSY2 213 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms