RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 MPP2Q14168 576 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 EGFLAMQ63HQ2 1017 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 AFTPHQ6ULP2 937 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 SERPINA13PQ6UXR4 307 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 USP45Q70EL2 814 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 ZC3HC1Q86WB0 502 aaKnown RBP23.9■■□□□ 1.42
SNX3-203ENST00000368979 CILP2Q8IUL8 1156 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 MDM1Q8TC05 714 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 HCAR2Q8TDS4 363 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 ISL2Q96A47 359 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 SGSM3Q96HU1 749 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 VPS39Q96JC1 886 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 KLF6Q99612 283 aaPredicted RBP23.9■■□□□ 1.42
SNX3-203ENST00000368979 P2RY13Q9BPV8 354 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 ZFYVE1Q9HBF4 777 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 DKK3Q9UBP4 350 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 SMG5Q9UPR3 1016 aaKnown RBP23.9■■□□□ 1.42
SNX3-203ENST00000368979 BRWD1Q9NSI6 2320 aa23.9■■□□□ 1.42
SNX3-203ENST00000368979 C1orf232A0A0U1RR37 186 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 ANTXRLA6NF34 631 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 NPIPB15A6NHN6 443 aaPredicted RBP23.89■■□□□ 1.42
SNX3-203ENST00000368979 GOLGA8RI6L899 631 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 ALDOAP04075 364 aaKnown RBP23.89■■□□□ 1.42
SNX3-203ENST00000368979 HNRNPLP14866 589 aaKnown RBP eCLIP23.89■■□□□ 1.42
SNX3-203ENST00000368979 CTHP32929 405 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 HADHAP40939 763 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 SLC18A1P54219 525 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 POLR2LP62875 67 aaKnown RBP23.89■■□□□ 1.42
SNX3-203ENST00000368979 SMAD2Q15796 467 aaKnown RBP23.89■■□□□ 1.42
SNX3-203ENST00000368979 FSTL4Q6MZW2 842 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 TPRG1Q6ZUI0 275 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 SLC44A3Q8N4M1 653 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 BANPQ8N9N5 519 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 OR4L1Q8NH43 312 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 HLA-CQ95604 372 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 KCNK9Q9NPC2 374 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 MARCH4Q9P2E8 410 aaPredicted RBP23.89■■□□□ 1.42
SNX3-203ENST00000368979 LIMD1Q9UGP4 676 aa23.89■■□□□ 1.42
SNX3-203ENST00000368979 ZNF106Q9H2Y7 1883 aaKnown RBP23.89■■□□□ 1.41
SNX3-203ENST00000368979 SPECC1L-ADORA2AF8WAN1 911 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 SPAG7O75391 227 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 PYGBP11216 843 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 CHN1P15882 459 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 MDH1P40925 334 aaKnown RBP23.89■■□□□ 1.41
SNX3-203ENST00000368979 MAGEA12P43365 314 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 ABCG1P45844 678 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 LEPRP48357 1165 aaKnown RBP23.89■■□□□ 1.41
SNX3-203ENST00000368979 PPARDQ03181 441 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 ENPP2Q13822 863 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 ZNF805Q5CZA5 627 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 STK40Q8N2I9 435 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 DCLK2Q8N568 766 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 ATXN7L3BQ96GX2 97 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 GPR22Q99680 433 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 BPIFA1Q9NP55 256 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 FKBPLQ9UIM3 349 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 MTO1Q9Y2Z2 717 aaKnown RBP23.89■■□□□ 1.41
SNX3-203ENST00000368979 PKP3Q9Y446 797 aa23.89■■□□□ 1.41
SNX3-203ENST00000368979 XIRP2A4UGR9 3374 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 FAM47DPA6NHR8 397 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 CLDN7O95471 211 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 PRNPP04156 253 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 OGNP20774 298 aaKnown RBP23.88■■□□□ 1.41
SNX3-203ENST00000368979 TNFRSF4P43489 277 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 CD151P48509 253 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 ELAVL3Q14576 367 aaKnown RBP23.88■■□□□ 1.41
SNX3-203ENST00000368979 TXNDC11Q6PKC3 985 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 CRTC1Q6UUV9 634 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 TSPAN33Q86UF1 283 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 PPM1EQ8WY54 764 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 OR8D1Q8WZ84 308 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 EZH1Q92800 747 aaPredicted RBP23.88■■□□□ 1.41
SNX3-203ENST00000368979 DNASE1L2Q92874 299 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 APOPT1Q96IL0 206 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 ACOX2Q99424 681 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 CATSPERZQ9NTU4 200 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 MKS1Q9NXB0 559 aa23.88■■□□□ 1.41
SNX3-203ENST00000368979 TCF20Q9UGU0 1960 aaKnown RBP23.87■■□□□ 1.41
SNX3-203ENST00000368979 TPP1O14773 563 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 CD3EAPO15446 510 aaKnown RBP23.87■■□□□ 1.41
SNX3-203ENST00000368979 LHCGRP22888 699 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 FOXN2P32314 431 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 GUCY1A3Q02108 690 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 PEX6Q13608 980 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 SEMA3AQ14563 771 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 LEXMQ3ZCV2 418 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 MRNIPQ6NTE8 343 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 OTUD6BQ8N6M0 293 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 TMIEQ8NEW7 156 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 ACMSDQ8TDX5 336 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 SCG3Q8WXD2 468 aaKnown RBP23.87■■□□□ 1.41
SNX3-203ENST00000368979 CAPS2Q9BXY5 557 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 FBXO6Q9NRD1 293 aaPredicted RBP23.87■■□□□ 1.41
SNX3-203ENST00000368979 CACNA2D2Q9NY47 1150 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 SUN2Q9UH99 717 aa23.87■■□□□ 1.41
SNX3-203ENST00000368979 UPK3BL1B0FP48 263 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 UPK3BL2E5RIL1 263 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 K7EQS6 105 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 HAUS5O94927 633 aa23.86■■□□□ 1.41
SNX3-203ENST00000368979 S1PR4O95977 384 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms