RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 NFKBIAP25963 317 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 ETV3P41162 512 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 SKOR1P84550 965 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 AP1B1Q10567 949 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 LLGL1Q15334 1064 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 DEFB133Q30KQ1 61 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 PRRT3Q5FWE3 981 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 FAXCQ5TGI0 409 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 USP45Q70EL2 814 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 B4GALNT4Q76KP1 1039 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 WDR92Q96MX6 357 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
CKS1B-203ENST00000368439 ANP32EQ9BTT0 268 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 LGR4Q9BXB1 951 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 CEP41Q9BYV8 373 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 CACNA1BQ00975 2339 aa18.96■□□□□ 0.63
CKS1B-203ENST00000368439 DMXL2Q8TDJ6 3036 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 TMEM8BA6NDV4 472 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 LMO7DNF2Z398 122 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 PPP1R12AO14974 1030 aaPredicted RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 TSHRP16473 764 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 HTR1BP28222 390 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 CD86P42081 329 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 NR2C2P49116 596 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 VAV2P52735 878 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 SRP54P61011 504 aaKnown RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 RPL26P61254 145 aaKnown RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 DAB2P98082 770 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 PTSQ03393 145 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 TFDP2Q14188 446 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 PRKD1Q15139 912 aaPredicted RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 CDKN3Q16667 212 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 HS1BP3Q53T59 392 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 ODF2Q5BJF6 829 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 TFDP3Q5H9I0 405 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 LRRC66Q68CR7 880 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 DENND2CQ68D51 928 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 ZCCHC8Q6NZY4 707 aaKnown RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 RFLNAQ6ZTI6 216 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 Q6ZVL8 140 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 DAAM2Q86T65 1068 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 RCOR2Q8IZ40 523 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 EXD1Q8NHP7 514 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 OR1E3Q8WZA6 343 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 TADA1Q96BN2 335 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 PDXPQ96GD0 296 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 LYSMD1Q96S90 227 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 BOCQ9BWV1 1114 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 SLC13A1Q9BZW2 595 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 BRD8Q9H0E9 1235 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 PCDH9Q9HC56 1237 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 FGF22Q9HCT0 170 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 HAUS2Q9NVX0 235 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 KCTD5Q9NXV2 234 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 IMPACTQ9P2X3 320 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 RPL26L1Q9UNX3 145 aaKnown RBP18.95■□□□□ 0.62
CKS1B-203ENST00000368439 DGKBQ9Y6T7 804 aa18.95■□□□□ 0.62
CKS1B-203ENST00000368439 RP1P56715 2156 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 CAPN8A6NHC0 703 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 YY2O15391 372 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 ZRANB2O95218 330 aaKnown RBP eCLIP18.94■□□□□ 0.62
CKS1B-203ENST00000368439 RASGRP1O95267 797 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 TGM2P21980 687 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 CTNNA1P35221 906 aaKnown RBP18.94■□□□□ 0.62
CKS1B-203ENST00000368439 BLKP51451 505 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 INSM1Q01101 510 aaPredicted RBP18.94■□□□□ 0.62
CKS1B-203ENST00000368439 ARHGEF7Q14155 803 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 HES3Q5TGS1 186 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 KAZNQ674X7 775 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 HID1Q8IV36 788 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 LRRC57Q8N9N7 239 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 OR56A4Q8NGH8 313 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 IMP4Q96G21 291 aaKnown RBP18.94■□□□□ 0.62
CKS1B-203ENST00000368439 CALR3Q96L12 384 aaKnown RBP18.94■□□□□ 0.62
CKS1B-203ENST00000368439 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 USP29Q9HBJ7 922 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 KLQ9UEF7 1012 aa18.94■□□□□ 0.62
CKS1B-203ENST00000368439 ZZEF1O43149 2961 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 CACNB4O00305 520 aaPredicted RBP18.93■□□□□ 0.62
CKS1B-203ENST00000368439 SOD1P00441 154 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 TEAD1P28347 426 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 DPTQ07507 201 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 PPP2R5EQ16537 467 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 QPCTQ16769 361 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 TEX44Q53QW1 395 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 C6orf132Q5T0Z8 1188 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 NDUFAF2Q8N183 169 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 CACTIN-AS1Q8N1I8 211 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 FSTL5Q8N475 847 aaPredicted RBP18.93■□□□□ 0.62
CKS1B-203ENST00000368439 SPC24Q8NBT2 197 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 LPCAT1Q8NF37 534 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 ATL2Q8NHH9 583 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 AGAP3Q96P47 875 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 TRIB3Q96RU7 358 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 HERPUD2Q9BSE4 406 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 ABCG8Q9H221 673 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 WDR26Q9H7D7 661 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 MRPL40Q9NQ50 206 aaKnown RBP18.93■□□□□ 0.62
CKS1B-203ENST00000368439 ZMIZ1Q9ULJ6 1067 aa18.93■□□□□ 0.62
CKS1B-203ENST00000368439 PCDHA3Q9Y5H8 950 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms