RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RRNAD1Q96FB5 475 aaKnown RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 VCPIP1Q96JH7 1222 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 HARBI1Q96MB7 349 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF570Q96NI8 536 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 BAG1Q99933 345 aaPredicted RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 AP1M1Q9BXS5 423 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 IFIH1Q9BYX4 1025 aaKnown RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 LTB4R2Q9NPC1 389 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 FZD3Q9NPG1 666 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 MKKSQ9NPJ1 570 aaPredicted RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 CWC15Q9P013 229 aaKnown RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 PADI1Q9ULC6 663 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 EXO1Q9UQ84 846 aaKnown RBP3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 ERVK-11Q9UQG0 969 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 CMAHPQ9Y471 501 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 STON1Q9Y6Q2 735 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 ARHGEF40Q8TER5 1519 aa3.83□□□□□ -1.8
RNU6-28P-201ENST00000362378 A0A1W2PR77 199 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 A8MV72 311 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 H7C0S8 307 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 UBE2CO00762 179 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 MITFO75030 526 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 EPN2O95208 641 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 FTCDO95954 541 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CD58P19256 250 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 GPTP24298 496 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 TBXAS1P24557 533 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 PNLIPRP2P54317 469 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 RAD23BP54727 409 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 TAS2R40P59535 323 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 SSBP2P81877 361 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CDC16Q13042 620 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 TNFAIP1Q13829 316 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 C15orf59Q2T9L4 293 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 LRIF1Q5T3J3 769 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 KRT79Q5XKE5 535 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 ANKRD54Q6NXT1 300 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CRELD2Q6UXH1 353 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 MTSS1LQ765P7 747 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 KBTBD6Q86V97 674 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CCDC13Q8IYE1 715 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 NKAIN3Q8N8D7 197 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 SYT2Q8N9I0 419 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 KCTD6Q8NC69 237 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 AGBL3Q8NEM8 1001 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 PRSS3P2Q8NHM4 247 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 C16orf52Q8NHV5 167 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 GABPB2Q8TAK5 448 aaPredicted RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 GPT2Q8TD30 523 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 TRPC4APQ8TEL6 797 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 INPP5DQ92835 1189 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 SORCS2Q96PQ0 1159 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 GFM1Q96RP9 751 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 ACOX2Q99424 681 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 MRPL1Q9BYD6 325 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 OSGEPL1Q9H4B0 414 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 ESRP2Q9H6T0 727 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 SLC35C2Q9NQQ7 365 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 DECR2Q9NUI1 292 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 CISD1Q9NZ45 108 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 COG5Q9UP83 839 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 PTRH2Q9Y3E5 179 aaKnown RBP3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 FAM169AQ9Y6X4 670 aa3.82□□□□□ -1.8
RNU6-28P-201ENST00000362378 LOC100509620A0A075B734 347 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 AKR1B15C9JRZ8 316 aaPredicted RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 WNT9BO14905 357 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 ADAMDEC1O15204 470 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 AKAP8O43823 692 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HIST1H2ABP04908 130 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 FGF2P09038 288 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 DDX5P17844 614 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HIST1H2ADP20671 130 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 MAOAP21397 527 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 KELP23276 732 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HOXC9P31274 260 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 ALDH7A1P49419 539 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 COMPP49747 757 aaPredicted RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 METAP2P50579 478 aaKnown RBP eCLIP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 ZP1P60852 638 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 NEDD9Q14511 834 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 KYNUQ16719 465 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 TMEM266Q2M3C6 531 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 Q4G0T1 1027 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 RARS2Q5T160 578 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 SLC2A7Q6PXP3 512 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 DPPA4Q7L190 304 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HIST3H2AQ7L7L0 130 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 MCEMP1Q8IX19 187 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 AVL9Q8NBF6 648 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 DDB2Q92466 427 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 RADILQ96JH8 1075 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 GCNAQ96QF7 691 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 POLDIP3Q9BY77 421 aaKnown RBP3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 HRH4Q9H3N8 390 aa3.81□□□□□ -1.8
RNU6-28P-201ENST00000362378 WDR26Q9H7D7 661 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms