RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ATAT1Q5SQI0 421 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 RANBP10Q6VN20 620 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 EP400NLQ6ZTU2 488 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 TREML1Q86YW5 311 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 PPP4R1Q8TF05 950 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 MYADMQ96S97 322 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 SCUBE2Q9NQ36 999 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 APOBEC2Q9Y235 224 aaKnown RBP13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 RPS6KL1Q9Y6S9 549 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 KIF26AQ9ULI4 1882 aaPredicted RBP13.21□□□□□ -0.29
SQSTM1-201ENST00000360718 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 K7ERQ8 282 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TMCC1O94876 653 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TYRP14679 529 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 AOC1P19801 751 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 GRK2P25098 689 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SCNN1BP51168 640 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 PLK1P53350 603 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 PLEKHG6Q3KR16 790 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 HSF5Q4G112 596 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 DENND5AQ6IQ26 1287 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 DTX3LQ8TDB6 740 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TADA1Q96BN2 335 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 ABCB8Q9NUT2 735 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TXNDC16Q9P2K2 825 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 MARCOQ9UEW3 520 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SCOCQ9UIL1 159 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 COL4A3Q01955 1670 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 INSIG1O15503 277 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 FKBP6O75344 327 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 USP1O94782 785 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 LINGO3P0C6S8 592 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 CTSOP43234 321 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 CHRNA4P43681 627 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 RHOAP61586 193 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 EML3Q32P44 896 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 PCID2Q5JVF3 399 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 TANGO2Q6ICL3 276 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SLC25A41Q8N5S1 370 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 NAT16Q8N8M0 369 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 NRG4Q8WWG1 115 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 FAM136AQ96C01 138 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 FEM1CQ96JP0 617 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 ARNT2Q9HBZ2 717 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 GPAMQ9HCL2 828 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SOX13Q9UN79 622 aa13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.2□□□□□ -0.3
SQSTM1-201ENST00000360718 DPPA5A6NC42 116 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 HEPACAM2A8MVW5 462 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ADH1CP00326 375 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 EPOP01588 193 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 CYP17A1P05093 508 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 SERPINE1P05121 402 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ARSAP15289 507 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 SLC1A6P48664 564 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ACTR3P61158 418 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PDE1BQ01064 536 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 DHCR24Q15392 516 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 FUT11Q495W5 492 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ARMC3Q5W041 872 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ULK2Q8IYT8 1036 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ZNF669Q96BR6 464 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PLA2G2FQ9BZM2 168 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 THG1LQ9NWX6 298 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 OBP2AQ9NY56 170 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 MARK1Q9P0L2 795 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 CDH7Q9ULB5 785 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PLA2G4CQ9UP65 541 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 FCF1Q9Y324 198 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 CXorf51AA0A1B0GTR3 108 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 MAGEA13PA6NCF6 341 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PRR5-ARHGAP8B1AHC4 643 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 SMAD6O43541 496 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 PLIN3O60664 434 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 BMP1P13497 986 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 CR2P20023 1033 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 HLA-DPA1P20036 260 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 ARHGAP8P85298 464 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
SQSTM1-201ENST00000360718 DMC1Q14565 340 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms