RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 PGFP49763 221 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PSME3P61289 254 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PPM1LQ5SGD2 360 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 TMEM198Q66K66 360 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 GLT6D1Q7Z4J2 308 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 KBTBD6Q86V97 674 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PDSS2Q86YH6 399 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 GPR150Q8NGU9 434 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PBXIP1Q96AQ6 731 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 MAELQ96JY0 434 aaKnown RBP9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 MARK4Q96L34 752 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 TMEM175Q9BSA9 504 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 ZDHHC7Q9NXF8 308 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 TMCO1Q9UM00 188 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 BBIP1A8MTZ0 92 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 SUPT3HB4E1H0 165 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 VPS26AO75436 327 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 SUPT3HO75486 399 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 S1PR4O95977 384 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PEX11BO96011 259 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 HERVK_113P63132 956 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 DUSP4Q13115 394 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 VEPH1Q14D04 833 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 PTGR2Q8N8N7 351 aaPredicted RBP9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 BHLHE22Q8NFJ8 381 aaPredicted RBP9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 ARRDC2Q8TBH0 407 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 GIPC2Q8TF65 315 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 UCMAQ8WVF2 138 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 USP13Q92995 863 aaPredicted RBP9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 DNAJC1Q96KC8 554 aaKnown RBP9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 UBXN10Q96LJ8 280 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 ERVK-6Q9BXR3 956 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 SPAG4Q9NPE6 437 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 TRPM5Q9NZQ8 1165 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 RNF112Q9ULX5 631 aa9.32□□□□□ -0.92
GTF3C2-202ENST00000359541 SLC38A8A6NNN8 435 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 MRASO14807 208 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 LYNP07948 512 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 HSPA1AP0DMV8 641 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 HSPA1BP0DMV9 641 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 FGFR3P22607 806 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ATP4BP51164 291 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 THOP1P52888 689 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PKNOX1P55347 436 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NFKB2Q00653 900 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NSUN2Q08J23 767 aaKnown RBP eCLIP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 GALNT3Q14435 633 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 SAMD4BQ5PRF9 694 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 HECTD3Q5T447 861 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PRMT9Q6P2P2 845 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ATG14Q6ZNE5 492 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 CIR1Q86X95 450 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 MFSD6LQ8IWD5 586 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 DDIASQ8IXT1 998 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ZNF683Q8IZ20 524 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NKAPQ8N5F7 415 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 TOP1MTQ969P6 601 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 L3HYPDHQ96EM0 354 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 UNC93B1Q9H1C4 597 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 TFB2MQ9H5Q4 396 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 CROTQ9UKG9 612 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ANGPT2O15123 496 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 SNX2O60749 519 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ACVRL1P37023 503 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 SCNN1BP51168 640 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PGGT1BP53609 377 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 INHBCP55103 352 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 MRPS22P82650 360 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NOGQ13253 232 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 RASIP1Q5U651 963 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 FBXO39Q8N4B4 442 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ADCY4Q8NFM4 1077 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 OVCA2Q8WZ82 227 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PLD4Q96BZ4 506 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 C19orf60Q96EN9 201 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ZNF419Q96HQ0 510 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 MUC3BQ9H195 1237 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 CCDC167Q9P0B6 97 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 SRRDQ9UH36 339 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 TMEM233B4DJY2 109 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 CASQ2O14958 399 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 AURKAO14965 403 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 FDXRP22570 491 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PEX2P28328 305 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 ALDH7A1P49419 539 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 RBBP5Q15291 538 aaKnown RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 PIGGQ5H8A4 983 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 LPCAT4Q643R3 524 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 UGT3A1Q6NUS8 523 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 RTN4RL1Q86UN2 441 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NPAS4Q8IUM7 802 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 REM2Q8IYK8 340 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 OR52K2Q8NGK3 314 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 RHEBL1Q8TAI7 183 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 NPAS2Q99743 824 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 MID1IP1Q9NPA3 183 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 GID8Q9NWU2 228 aa9.31□□□□□ -0.92
GTF3C2-202ENST00000359541 TRMT6Q9UJA5 497 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms