RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 VPS45Q9NRW7 570 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 DAPK2Q9UIK4 370 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 H7C4K7 107 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RPL5P46777 297 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 IL2P60568 153 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 NAA20P61599 178 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 STXBP5Q5T5C0 1151 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 NPWQ8N729 165 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 OR56A4Q8NGH8 313 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 IRGQQ8WZA9 623 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 FIG4Q92562 907 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 PCDHAC1Q9H158 963 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SELENONQ9NZV5 590 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 GNEQ9Y223 722 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 PRKAR2AP13861 404 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ITGALP20701 1170 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SLC10A7Q0GE19 358 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 TSTD2Q5T7W7 516 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ZNF555Q8NEP9 628 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 OR4K2Q8NGD2 314 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RSPH1Q8WYR4 309 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 RTP4Q96DX8 246 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 WDR83Q9BRX9 315 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 MLPHQ9BV36 600 aaPredicted RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 NOL11Q9H8H0 719 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 ACTR8Q9H981 624 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 EIF3LQ9Y262 564 aaKnown RBP12.28□□□□□ -0.44
COL20A1-201ENST00000358894 MYRFQ9Y2G1 1151 aa12.28□□□□□ -0.44
COL20A1-201ENST00000358894 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 DUSP11O75319 330 aaKnown RBP12.27□□□□□ -0.44
COL20A1-201ENST00000358894 CYBBP04839 570 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 PRKCGP05129 697 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 CCNG1P51959 295 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 GALNT2Q10471 571 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 GRB14Q14449 540 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 TIGD2Q4W5G0 525 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 ACTRT2Q8TDY3 377 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 NAT14Q8WUY8 206 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 FCRL5Q96RD9 977 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 TBCDQ9BTW9 1192 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 KCNK13Q9HB14 408 aa12.27□□□□□ -0.44
COL20A1-201ENST00000358894 MTF2Q9Y483 593 aaPredicted RBP12.27□□□□□ -0.44
COL20A1-201ENST00000358894 A0A0J9YYE9 177 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 GPR32O75388 356 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 NNMTP40261 264 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 INPP1P49441 399 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 ARHGEF6Q15052 776 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 VPS26BQ4G0F5 336 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 PNPLA1Q8N8W4 532 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 OR7D4Q8NG98 312 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 OR6K2Q8NGY2 324 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 ZFYVE19Q96K21 471 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 SPATA16Q9BXB7 569 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 FFAR3O14843 346 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 GPR42O15529 346 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 MT-ND1P03886 318 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 KPNA1P52294 538 aaPredicted RBP12.27□□□□□ -0.45
COL20A1-201ENST00000358894 TRAF2Q12933 501 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 PLD1Q13393 1074 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 HNRNPDQ14103 355 aaKnown RBP12.27□□□□□ -0.45
COL20A1-201ENST00000358894 ADRM1Q16186 407 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 STK32CQ86UX6 486 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 MAGEE2Q8TD90 523 aaPredicted RBP12.27□□□□□ -0.45
COL20A1-201ENST00000358894 C19orf60Q96EN9 201 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 BTN2A3PQ96KV6 586 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 DACH2Q96NX9 599 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 CCDC28BQ9BUN5 200 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 CCDC106Q9BWC9 280 aa12.27□□□□□ -0.45
COL20A1-201ENST00000358894 NOL6Q9H6R4 1146 aaKnown RBP12.27□□□□□ -0.45
COL20A1-201ENST00000358894 FAM149AA5PLN7 773 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 J3KR12 359 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 UBXN8O00124 270 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 TBC1D4O60343 1298 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 DLGAP3O95886 979 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 LDLRP01130 860 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 KCNA10Q16322 511 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 TTLL9Q3SXZ7 439 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 CACHD1Q5VU97 1274 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 PAOXQ6QHF9 649 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 CROCCP3Q8IVE0 287 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 HERC6Q8IVU3 1022 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 UROC1Q96N76 676 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 GPR22Q99680 433 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 TRMT13Q9NUP7 481 aaKnown RBP12.26□□□□□ -0.45
COL20A1-201ENST00000358894 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 UBR3Q6ZT12 1888 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 DCLK1O15075 740 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 PQBP1O60828 265 aaKnown RBP12.26□□□□□ -0.45
COL20A1-201ENST00000358894 SIX3O95343 332 aaPredicted RBP12.26□□□□□ -0.45
COL20A1-201ENST00000358894 FGF1P05230 155 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 RHOQP17081 205 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 CTPS1P17812 591 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 HK2P52789 917 aa12.26□□□□□ -0.45
COL20A1-201ENST00000358894 CCDC81Q6ZN84 652 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms