RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ZNHIT2Q9UHR6 403 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 CPA4Q9UI42 421 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 DNMT3LQ9UJW3 386 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 POLR3HQ9Y535 204 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 IRGMA1A4Y4 181 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 RHBDL3P58872 404 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 FCHO2Q0JRZ9 810 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 CPT1BQ92523 772 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 LPGAT1Q92604 370 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 TNFRSF25Q93038 417 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 UROC1Q96N76 676 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 KLHL32Q96NJ5 620 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 ATP13A3Q9H7F0 1226 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 AGPSO00116 658 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 POLR2EP19388 210 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 PTP4A2Q12974 167 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 LRRC57Q8N9N7 239 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 ZNF607Q96SK3 696 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 RBM4BQ9BQ04 359 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 RBM4Q9BWF3 364 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 SMPD3Q9NY59 655 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 CLTCQ00610 1675 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 PGRMC2O15173 223 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 HLA-DQA2P01906 255 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 FTH1P02794 183 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 DLG2Q15700 870 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 GPAT3Q53EU6 434 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 SLC25A24Q6NUK1 477 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 FBXL19Q6PCT2 694 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 C12orf50Q8NA57 414 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 RCOR3Q9P2K3 495 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 PXDNQ92626 1479 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 SAGE2PA6NJ88 616 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PLK4O00444 970 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 HIST1H2ABP04908 130 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 FGRP09769 529 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 AKR1A1P14550 325 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PAX3P23760 479 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 HNMTP50135 292 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 SCNN1GP51170 649 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 HIST3H2AQ7L7L0 130 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 LRRC52Q8N7C0 313 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 RNASE11Q8TAA1 199 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 PIH1D2Q8WWB5 315 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 HIST1H2ACQ93077 130 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PDCD10Q9BUL8 212 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PDHXO00330 501 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 WNT10BO00744 389 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 NOL4O94818 638 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 ABATP80404 500 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 KCTD19Q17RG1 926 aaPredicted RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 SLC25A52Q3SY17 297 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 CERCAMQ5T4B2 595 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PLET1Q6UQ28 207 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 HM13Q8TCT9 377 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 SPOCK2Q92563 424 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 NRCAMQ92823 1304 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 MTHFRP42898 656 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 BCAP31P51572 246 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 ZNHIT3Q15649 155 aaPredicted RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 HECTD3Q5T447 861 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 FAM131AQ6UXB0 335 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 YDJCA8MPS7 323 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 RGS10O43665 173 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 CCNKO75909 580 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 LYPLA2O95372 231 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 DHFRP00374 187 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 MAXP61244 160 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 RALGDSQ12967 914 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PPP1R15BQ5SWA1 713 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 DET1Q7L5Y6 550 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 GPR156Q8NFN8 814 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 TRNAU1APQ9NX07 287 aaKnown RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 AP3D1O14617 1153 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 FAM155BO75949 473 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 FADS2O95864 444 aaKnown RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 ADCYAP1R1P41586 468 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PFKPQ01813 784 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PPP1R26Q5T8A7 1209 aaPredicted RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 ZNF655Q8N720 491 aaPredicted RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 GLOD4Q9HC38 313 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 THG1LQ9NWX6 298 aaKnown RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 KCNE2Q9Y6J6 123 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 TCF4P15884 667 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 STARP49675 285 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 IL18R1Q13478 541 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PTPN20Q4JDL3 420 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 KHDC1Q4VXA5 237 aaKnown RBP14.85□□□□□ -0.03
CHD4-201ENST00000357008 BRMS1LQ5PSV4 323 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 TAPT1Q6NXT6 567 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 PLPPR4Q7Z2D5 763 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 COL26A1Q96A83 441 aa14.85□□□□□ -0.03
CHD4-201ENST00000357008 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 WNT7AO00755 349 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 TFECO14948 347 aaPredicted RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms