RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 BRAT1Q6PJG6 821 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 TSPAN33Q86UF1 283 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 OR8D1Q8WZ84 308 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 ERLEC1Q96DZ1 483 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 MCMBPQ9BTE3 642 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 CAPS2Q9BXY5 557 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 TRABDQ9H4I3 376 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 SSU72Q9NP77 194 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 IL17CQ9P0M4 197 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 DKK3Q9UBP4 350 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 PPM1HQ9ULR3 514 aa18.17■□□□□ 0.5
SMARCD3-202ENST00000356800 A0A1W2PQ67 120 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 CCDC162PA2VCL2 907 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 A8MX80 341 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 EPHX1P07099 455 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 TIMP2P16035 220 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 CREB1P16220 341 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 TIE1P35590 1138 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 MDH1P40925 334 aaKnown RBP18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 SLC18A1P54219 525 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 TDGQ13569 410 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 TERF2Q15554 542 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 PUS10Q3MIT2 529 aaKnown RBP18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 NEPROQ6NW34 567 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 CRTC1Q6UUV9 634 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 DENND6AQ8IWF6 608 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 CDKN2AIPNLQ96HQ2 116 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 SMC6Q96SB8 1091 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 CPNE1Q99829 537 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 GPR63Q9BZJ6 419 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 MFSD1Q9H3U5 465 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 SLC2A4RGQ9NR83 387 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 SUN2Q9UH99 717 aa18.16■□□□□ 0.5
SMARCD3-202ENST00000356800 C1orf232A0A0U1RR37 186 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 A0A1W2PPM1 405 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 TMEM120BA0PK00 339 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 CLDN7O95471 211 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PRNPP04156 253 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 SRFP11831 508 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 LHCGRP22888 699 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 GABRB3P28472 473 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 HMGCLP35914 325 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 SLC1A2P43004 574 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PRAMEP78395 509 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 UGP2Q16851 508 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 USP45Q70EL2 814 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 STRA8Q7Z7C7 330 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 CHPFQ8IZ52 775 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PNPLA1Q8N8W4 532 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 TMIEQ8NEW7 156 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 OR6P1Q8NGX9 317 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PIP4K2CQ8TBX8 421 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 ALKBH8Q96BT7 664 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 SELENOSQ9BQE4 189 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 BPIFA1Q9NP55 256 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 NSMCE4AQ9NXX6 385 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 MARCH4Q9P2E8 410 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 C16orf96A6NNT2 1141 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 UPK3BL1B0FP48 263 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 UPK3BL2E5RIL1 263 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 KPNA3O00505 521 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 STX7O15400 261 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PRPF4O43172 522 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 GOT2P00505 430 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 MT-ND3P03897 115 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 KRT4P19013 534 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 GP5P40197 560 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 POLR2LP62875 67 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 MPP1Q00013 466 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PDE1BQ01064 536 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PFKPQ01813 784 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 CTBP1Q13363 440 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 THOC5Q13769 683 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 BMPR2Q13873 1038 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 ZNF470Q6ECI4 717 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 TIFABQ6ZNK6 161 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 TPRG1Q6ZUI0 275 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 PTAR1Q7Z6K3 402 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 HCAR2Q8TDS4 363 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 ARRDC3Q96B67 414 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 CENPTQ96BT3 561 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 SRPK1Q96SB4 655 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 FAM167BQ9BTA0 163 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 ZFYVE1Q9HBF4 777 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 B4GALT6Q9UBX8 382 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 FKBPLQ9UIM3 349 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 SMG5Q9UPR3 1016 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 FAM50BQ9Y247 325 aa18.15■□□□□ 0.5
SMARCD3-202ENST00000356800 TRIM49D1C9J1S8 452 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 NPC1O15118 1278 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 GLULP15104 373 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 ABCG1P45844 678 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 CAMK2GQ13555 558 aaPredicted RBP18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 C2orf27AQ580R0 203 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 GRTP1Q5TC63 336 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 SH2D5Q6ZV89 423 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 C2CD4AQ8NCU7 369 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 606.5 ms