RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 EFHBQ8N7U6 833 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 PNPLA1Q8N8W4 532 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 ZNF707Q96C28 371 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 MYO19Q96H55 970 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 SMIM14Q96QK8 99 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 TCF12Q99081 682 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 MRPL57Q9BQC6 102 aaKnown RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 MRPL46Q9H2W6 279 aaKnown RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 GPAMQ9HCL2 828 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 CRYL1Q9Y2S2 319 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 DNAJC6O75061 913 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 ZNF821O75541 412 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 LYPLA1O75608 230 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 IGSF6O95976 241 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 SNCBQ16143 134 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 C9orf50Q5SZB4 431 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 AGAP9Q5VTM2 703 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 FAM109BQ6ICB4 259 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 CAMK1DQ8IU85 385 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 TTC30BQ8N4P2 665 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 PIH1D2Q8WWB5 315 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 OTUB2Q96DC9 234 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 BBS2Q9BXC9 721 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 SPHK2Q9NRA0 654 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 IGSF5Q9NSI5 407 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 EVLQ9UI08 416 aaPredicted RBP18.5■□□□□ 0.55
TRIM41-202ENST00000351937 ZFP69BQ9UJL9 534 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 HS3ST2Q9Y278 367 aa18.5■□□□□ 0.55
TRIM41-202ENST00000351937 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 NEDD8-MDP1E9PL57 170 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 HTRA2O43464 458 aaPredicted RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 SOCS5O75159 536 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 KITP10721 976 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 USP4Q13107 963 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 LIPMQ5VYY2 423 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 HEXDCQ8WVB3 486 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 ISG20Q96AZ6 181 aaKnown RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 UBXN10Q96LJ8 280 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 ZSWIM3Q96MP5 696 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 SORT1Q99523 831 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 XPR1Q9UBH6 696 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 DNAJC16Q9Y2G8 782 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 NOTCH4Q99466 2003 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 CFAP73A6NFT4 308 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 H7C0S8 307 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 TRAFD1O14545 582 aaPredicted RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 STX7O15400 261 aaKnown RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 ATP5HO75947 161 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 LTA4HP09960 611 aaKnown RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 CDKN2DP55273 166 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 DGKKQ5KSL6 1271 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 OR2AP1Q8NGE2 309 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 WWP1Q9H0M0 922 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 ATP13A3Q9H7F0 1226 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 MARCOQ9UEW3 520 aaPredicted RBP18.49■□□□□ 0.55
TRIM41-202ENST00000351937 ANKRD36A6QL64 1941 aa18.49■□□□□ 0.55
TRIM41-202ENST00000351937 WISP3O95389 354 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 SRCP12931 536 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 NQO1P15559 274 aaKnown RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 AQP5P55064 265 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 FUT11Q495W5 492 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 KLC3Q6P597 504 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 CLNKQ7Z7G1 428 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 RBM23Q86U06 439 aaKnown RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 SPATA6LQ8N4H0 392 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 OR6K2Q8NGY2 324 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 SKA1Q96BD8 255 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 LINC00597Q9H2U6 94 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 POPDC3Q9HBV1 291 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 TXLNGQ9NUQ3 528 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 POLR3BQ9NW08 1133 aaPredicted RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 TRIM33Q9UPN9 1127 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 VPS9D1Q9Y2B5 631 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 SLC4A1P02730 911 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 FDXRP22570 491 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 SNRPD1P62314 119 aaKnown RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 ZBTB16Q05516 673 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 CSHL1Q14406 222 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 ZNF549Q6P9A3 640 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 NAPRTQ6XQN6 538 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 KIF2BQ8N4N8 673 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 RPL10LQ96L21 214 aaKnown RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 FAM96AQ9H5X1 160 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 MRPS23Q9Y3D9 190 aaKnown RBP18.48■□□□□ 0.55
TRIM41-202ENST00000351937 ZNF711Q9Y462 761 aa18.48■□□□□ 0.55
TRIM41-202ENST00000351937 CHUKO15111 745 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 UNC5CO95185 931 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 ATP5BP06576 529 aaKnown RBP18.47■□□□□ 0.55
TRIM41-202ENST00000351937 CCDC166P0CW27 439 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 TYRP14679 529 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 CEBPBP17676 345 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 SERPINB3P29508 390 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 ARRB2P32121 409 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 HMGCLP35914 325 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 CTSOP43234 321 aaPredicted RBP18.47■□□□□ 0.55
TRIM41-202ENST00000351937 ASPHQ12797 758 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 DMC1Q14565 340 aa18.47■□□□□ 0.55
TRIM41-202ENST00000351937 ASTLQ6HA08 431 aaPredicted RBP18.47■□□□□ 0.55
TRIM41-202ENST00000351937 ADGRG2Q8IZP9 1017 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms