RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 TIAL1Q01085 375 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 LSM12Q3MHD2 195 aaKnown RBP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ACCSLQ4AC99 568 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ACSBG2Q5FVE4 666 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 AFTPHQ6ULP2 937 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 LINGO4Q6UY18 593 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ACAD11Q709F0 780 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ULK2Q8IYT8 1036 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 CFAP61Q8NHU2 1237 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 BHMTQ93088 406 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 FEM1AQ9BSK4 669 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 THTPAQ9BU02 230 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 CCDC28BQ9BUN5 200 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ADGRE3Q9BY15 652 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 C15orf41Q9Y2V0 281 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 GOLGA8QA0A0J9YX86 632 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 TYW5A2RUC4 315 aaKnown RBP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 GOLGA8OA6NCC3 632 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 GOLGA8NF8WBI6 632 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 LILRB3O75022 631 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 FGF18O76093 207 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 CSPG5O95196 566 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 MZF1P28698 734 aaPredicted RBP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 EPHA3P29320 983 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 KLF10Q13118 480 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 ISCA2Q86U28 154 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 LPCAT1Q8NF37 534 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 OR4K2Q8NGD2 314 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 SH3RF2Q8TEC5 729 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 TMA16Q96EY4 203 aaKnown RBP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 CDYLQ9Y232 598 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 OR51B4Q9Y5P0 310 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 KIAA0100Q14667 2235 aaKnown RBP20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 PLXNA4Q9HCM2 1894 aa20.37■□□□□ 0.85
CHRNA3-202ENST00000348639 MEI4A8MW99 385 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 ANKRD66B4E2M5 251 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 LUC7L3O95232 432 aaKnown RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 PENKP01210 267 aaPredicted RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 SLC4A1P02730 911 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 ZXDBP98169 803 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 CREMQ03060 361 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 NCEH1Q6PIU2 408 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 NET1Q7Z628 596 aaPredicted RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 AARSD1Q9BTE6 412 aaKnown RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 ALG9Q9H6U8 611 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 CYP4F12Q9HCS2 524 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 ASB3Q9Y575 518 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 CPQQ9Y646 472 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 F8W8V4 182 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 NEMP1O14524 444 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 TGM5O43548 720 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 CNPP09543 421 aaKnown RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 LPOP22079 712 aaPredicted RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 SLC25A3Q00325 362 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 SH2D4BQ5SQS7 431 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 FAM217AQ8IXS0 508 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 TCF12Q99081 682 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 OSBPL1AQ9BXW6 950 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 EML4Q9HC35 981 aaKnown RBP20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 LHX3Q9UBR4 397 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 VPS28Q9UK41 221 aa20.36■□□□□ 0.85
CHRNA3-202ENST00000348639 TRPC5OSA6NMA1 111 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 H0Y3Z8 333 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 KIAA0355O15063 1070 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 SLC22A2O15244 555 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 COX4I1P13073 169 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 CD1DP15813 335 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 GABRR2P28476 465 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 CYP4F8P98187 520 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 GALNT1Q10472 559 aaPredicted RBP20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 TRAF2Q12933 501 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 FBXO46Q6PJ61 603 aaPredicted RBP20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 CPSF7Q8N684 471 aaKnown RBP20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 PPP1R36Q96LQ0 422 aa20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 MTF2Q9Y483 593 aaPredicted RBP20.35■□□□□ 0.85
CHRNA3-202ENST00000348639 A0A088AWK7 358 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 LOC100653049A0A140TA62 436 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 CIB2O75838 187 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 KRT34O76011 436 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 JUNP05412 331 aaKnown RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 HNRNPLP14866 589 aaKnown RBP eCLIP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ZNF37AP17032 561 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 IMPDH1P20839 514 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 SP100P23497 879 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 KCNC1P48547 511 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 NFKB2Q00653 900 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 PDCD2Q16342 344 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 TRMT5Q32P41 509 aaKnown RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 PHF21BQ96EK2 531 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ALG14Q96F25 216 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 FAR2Q96K12 515 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 CLPTM1LQ96KA5 538 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ZBP1Q9H171 429 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 STK39Q9UEW8 545 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 SLC7A8Q9UHI5 535 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 PRSS56P0CW18 603 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 CDC25CP30307 473 aa20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 ADSLP30566 484 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 GTF2A1P52655 376 aaPredicted RBP20.34■□□□□ 0.85
CHRNA3-202ENST00000348639 CDH18Q13634 790 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms