RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ATG13O75143 517 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SSR2P43308 183 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 MANFP55145 182 aaKnown RBP23.13■■□□□ 1.29
NPAS3-201ENST00000346562 POTEHQ6S545 545 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 KCNK18Q7Z418 384 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 FBXW8Q8N3Y1 598 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 HIPK3Q9H422 1215 aa23.13■■□□□ 1.29
NPAS3-201ENST00000346562 SMIM35A0A1B0GVV1 85 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 LYNP07948 512 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 TFPIP10646 304 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CCR3P51677 355 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 PRKG2Q13237 762 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 NAT16Q8N8M0 369 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 METTL21AQ8WXB1 218 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 OR52E6Q96RD3 313 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 AARSD1Q9BTE6 412 aaKnown RBP23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CAB39LQ9H9S4 337 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 ING3Q9NXR8 418 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 hCG_1818297A0A087WSY0 165 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CCDC182A6NF36 153 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 LIN7AO14910 233 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-201ENST00000346562 GABRB2P47870 512 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 ARFIP1P53367 373 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 RBBP4Q09028 425 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 POLR3HQ9Y535 204 aaPredicted RBP23.12■■□□□ 1.29
NPAS3-201ENST00000346562 COLEC10Q9Y6Z7 277 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 AKT2P31751 481 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 UBAP1Q9NZ09 502 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CLDN5O00501 218 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 UGT2B17O75795 530 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 PARP15Q460N3 678 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 C9orf57Q5W0N0 161 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 PHC3Q8NDX5 983 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 RHOBTB2Q9BYZ6 727 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
NPAS3-201ENST00000346562 CCDC85CA6NKD9 419 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 CHN2P52757 468 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 HDAC7Q8WUI4 952 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 AP2M1Q96CW1 435 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 A0A1W2PQ67 120 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 RTP1P59025 263 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 RAB21Q9UL25 225 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 SAMHD1Q9Y3Z3 626 aaKnown RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 ERCC2P18074 760 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 HOXA10P31260 410 aaPredicted RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 PSMD8P48556 350 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 ITGADQ13349 1161 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 CPSF6Q16630 551 aaKnown RBP eCLIP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 AADACL2Q6P093 401 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 PPP1R13LQ8WUF5 828 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 FAM192AQ9GZU8 254 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 MRPS7Q9Y2R9 242 aaKnown RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 PCDHB1Q9Y5F3 818 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 SLC26A3P40879 764 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 C15orf52Q6ZUT6 534 aaKnown RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 SLC9A9Q8IVB4 645 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 KCTD5Q9NXV2 234 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 PSMD13Q9UNM6 376 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 ATXN2Q99700 1313 aaKnown RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 OGNP20774 298 aaKnown RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 OR1D2P34982 312 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 TUSC3Q13454 348 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 TSHZ1Q6ZSZ6 1077 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 TMC8Q8IU68 726 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 CROCCP3Q8IVE0 287 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 BTN2A3PQ96KV6 586 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 FCRL2Q96LA5 508 aaPredicted RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 ACE2Q9BYF1 805 aaPredicted RBP23.11■■□□□ 1.29
NPAS3-201ENST00000346562 OGDHLQ9ULD0 1010 aa23.11■■□□□ 1.29
NPAS3-201ENST00000346562 GLYATL1P3A0A0U1RQE8 302 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 A0A1W2PQH9 124 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 FAM92AA1XBS5 289 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 PAGE1O75459 146 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 CALCAP01258 141 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 ZNF846Q147U1 533 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 PSRC1Q6PGN9 363 aaPredicted RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 BEND5Q7L4P6 421 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 BAP1Q92560 729 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 MRPL45Q9BRJ2 306 aaKnown RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 DSN1Q9H410 356 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 LRATO95237 230 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 PIRTP0C851 137 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 IDSP22304 550 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 RFX4Q33E94 735 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 ATP13A5Q4VNC0 1218 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 REM2Q8IYK8 340 aaPredicted RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 LNX1Q8TBB1 728 aaPredicted RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 HDAC10Q969S8 669 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 MCMBPQ9BTE3 642 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 LRRC19Q9H756 370 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 TTC29Q8NA56 475 aaPredicted RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 ART4Q93070 314 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 SLC28A3Q9HAS3 691 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 SNX15Q9NRS6 342 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 DEC1Q9P2X7 70 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 VIPP01282 170 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 SELPP16109 830 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 RFTN2Q52LD8 501 aaPredicted RBP23.1■■□□□ 1.29
NPAS3-201ENST00000346562 CPTPQ5TA50 214 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 BBS12Q6ZW61 710 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms