RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 MARC1Q5VT66 337 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 GRAMD4Q6IC98 578 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 CASC4Q6P4E1 433 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 RFWD3Q6PCD5 774 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SLCO6A1Q86UG4 719 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 LRRC6Q86X45 466 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 ZNF354CQ86Y25 554 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SRRM1Q8IYB3 904 aaKnown RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 RGL4Q8IZJ4 473 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 TEX26Q8N6G2 289 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 MDM1Q8TC05 714 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 FOXJ1Q92949 421 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 TTC17Q96AE7 1141 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 OXNAD1Q96HP4 312 aaPredicted RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 BBC3Q96PG8 261 aaPredicted RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 TBL1YQ9BQ87 522 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 IL22Q9GZX6 179 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SLC25A51Q9H1U9 297 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 PLAC1Q9HBJ0 212 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SSU72Q9NP77 194 aaKnown RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 SCUBE2Q9NQ36 999 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 DKK4Q9UBT3 224 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 PCOLCE2Q9UKZ9 415 aa13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.23
HERPUD1-202ENST00000344114 MAGEB16A2A368 324 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 PRRT4C9JH25 899 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 GREM1O60565 184 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 PRAMEF11O60813 436 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 NDUFS2O75306 463 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 KLKB1P03952 638 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 POLBP06746 335 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 BRAFP15056 766 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 GNSP15586 552 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 ETFBP38117 255 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 SPARCL1Q14515 664 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 CRYMQ14894 314 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 WDR45BQ5MNZ6 344 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 SDE2Q6IQ49 451 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 Q6ZNB5 142 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 HTR3DQ70Z44 454 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 SETD3Q86TU7 594 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 METTL3Q86U44 580 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 FAM217AQ8IXS0 508 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 CHPFQ8IZ52 775 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 BAHD1Q8TBE0 780 aaPredicted RBP13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 DNASE2BQ8WZ79 361 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 CDKL2Q92772 493 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 MRGPRX1Q96LB2 322 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 SMC6Q96SB8 1091 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 TRABDQ9H4I3 376 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 INTS9Q9NV88 658 aaKnown RBP13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 MARK1Q9P0L2 795 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF510Q9Y2H8 683 aa13.58□□□□□ -0.24
HERPUD1-202ENST00000344114 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 TMEM120BA0PK00 339 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 ILVBLA1L0T0 632 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 J3KR12 359 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 GFRA2O00451 464 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 PRPF4O43172 522 aaKnown RBP eCLIP13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 USP1O94782 785 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 DKK1O94907 266 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 RHOCP08134 193 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF883P0CG24 379 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 MAOBP27338 520 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 SERPINB9P50453 376 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 SLC18A1P54219 525 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 GNA12Q03113 381 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 LGSNQ5TDP6 509 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF783Q6ZMS7 281 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 MARK2Q7KZI7 788 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 CTAGE3PQ8IX95 158 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 BBS5Q8N3I7 341 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 MZB1Q8WU39 189 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 ALKBH8Q96BT7 664 aaKnown RBP13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 SLC6A17Q9H1V8 727 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 NT5MQ9NPB1 228 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 TOR4AQ9NXH8 423 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 MOCS1Q9NZB8 636 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 SOX13Q9UN79 622 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 RAXQ9Y2V3 346 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 CELSR3Q9NYQ7 3312 aa13.57□□□□□ -0.24
HERPUD1-202ENST00000344114 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 FAM237BA0A1B0GVD1 139 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 USP12O75317 370 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CNTFP26441 200 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 HOXD9P28356 352 aaPredicted RBP13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 CD6P30203 668 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ADRA1AP35348 466 aa13.56□□□□□ -0.24
HERPUD1-202ENST00000344114 ACVRL1P37023 503 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms