RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 FAM237BA0A1B0GVD1 139 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 A8MX80 341 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 C10orf142B7Z368 130 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 ELFN1P0C7U0 828 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 ELK3P41970 407 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 PXNP49023 591 aaPredicted RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 LIG3P49916 1009 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 ZNF140P52738 457 aaPredicted RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 PTSQ03393 145 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 TSTD2Q5T7W7 516 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 KIAA1161Q6NSJ0 714 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 CASC4Q6P4E1 433 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 WDR5BQ86VZ2 330 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 GSPT2Q8IYD1 628 aaKnown RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 ZBED8Q8IZ13 594 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 MAML2Q8IZL2 1156 aaPredicted RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 CXorf40AQ8TE69 158 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 STYXQ8WUJ0 223 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 EID2BQ96D98 161 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 WRAP53Q9BUR4 548 aaKnown RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 WSB2Q9NYS7 404 aaPredicted RBP17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 PLXND1Q9Y4D7 1925 aa17.89■□□□□ 0.45
SDCBP2-201ENST00000339987 ZDBF2Q9HCK1 2354 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 IGHV1OR15-9A0A0B4J2B8 117 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 A0A0U1RQS6 177 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 RGSL1A5PLK6 1076 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 LRRC72A6NJI9 287 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 GPR37L1O60883 481 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 PCDH8O95206 1070 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 C1SP09871 688 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 PGAM1P18669 254 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 CD6P30203 668 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 ACSL1P33121 698 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 MAGEA4P43358 317 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 CREB5Q02930 508 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 ACVR1Q04771 509 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 SLMAPQ14BN4 828 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 FASTKD3Q14CZ7 662 aaKnown RBP17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 TMEM135Q86UB9 458 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 IGDCC3Q8IVU1 814 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 FBXO36Q8NEA4 188 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 PYROXD1Q8WU10 500 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 TOE1Q96GM8 510 aaKnown RBP17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 COQ10AQ96MF6 247 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 CHRAC1Q9NRG0 131 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 PKD2L2Q9NZM6 624 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 CHMP2BQ9UQN3 213 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 PKP3Q9Y446 797 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 KCTD3Q9Y597 815 aa17.88■□□□□ 0.45
SDCBP2-201ENST00000339987 CACNA1IQ9P0X4 2223 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 FAM86C2PA6NEL3 165 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 PRR33A8MZF0 331 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 STX7O15400 261 aaKnown RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 MMP20O60882 483 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 SEMA4FO95754 770 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 TTC4O95801 387 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 SLC4A1P02730 911 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 FAM153BP0C7A2 387 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 C6P13671 934 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 RPS21P63220 83 aaKnown RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 DMWDQ09019 674 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 SKIDA1Q1XH10 827 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 FAM153CQ494X1 144 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 TMEM259Q4ZIN3 620 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 USP39Q53GS9 565 aaKnown RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 STEAP4Q687X5 459 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 TSSK4Q6SA08 328 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 CYP2U1Q7Z449 544 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 HSD11B1LQ7Z5J1 315 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 TRIM69Q86WT6 500 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 HORMAD1Q86X24 394 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 ANKMY2Q8IV38 441 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 AENQ8WTP8 325 aaKnown RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 PCED1AQ9H1Q7 454 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 RAD18Q9NS91 495 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 TREX1Q9NSU2 369 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 NLE1Q9NVX2 485 aaPredicted RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 KCTD5Q9NXV2 234 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 NFKBIL1Q9UBC1 381 aaPredicted RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 ZC3H7BQ9UGR2 993 aaKnown RBP17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 SCN8AQ9UQD0 1980 aa17.87■□□□□ 0.45
SDCBP2-201ENST00000339987 KMT2EQ8IZD2 1858 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3DA0A087WVF3 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3IA0A087WXS9 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3EA0A087X179 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3KA0A087X1G2 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3FA6NER0 549 aaPredicted RBP17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3LB9A6J9 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 RNGTTO60942 597 aaKnown RBP17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 USP1O94782 785 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TBC1D3HP0C7X1 549 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 TSHRP16473 764 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 GM2AP17900 193 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 NMBRP28336 390 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 HADHAP40939 763 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 SPINT3P49223 89 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 NUBP1P53384 320 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 PTPN5P54829 565 aa17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 CSTF1Q05048 431 aaKnown RBP17.86■□□□□ 0.45
SDCBP2-201ENST00000339987 AGERQ15109 404 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7626.9 ms