RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PRSS38A1L453 326 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 DAPK3O43293 454 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 FAM87AP0C7U9 286 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 ETV5P41161 510 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 CSRP3P50461 194 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 OGDHQ02218 1023 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 NSUN2Q08J23 767 aaKnown RBP eCLIP15.66■□□□□ 0.1
LINC01116-202ENST00000339037 RFTN1Q14699 578 aaPredicted RBP15.66■□□□□ 0.1
LINC01116-202ENST00000339037 ACOX1Q15067 660 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 CCDC183Q5T5S1 534 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 TMEM164Q5U3C3 297 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 PNCKQ6P2M8 343 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 RFX8Q6ZV50 586 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 TMPRSS9Q7Z410 1059 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 ZFAND4Q86XD8 727 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 USP7Q93009 1102 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 ERGIC2Q96RQ1 377 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 SEMA6CQ9H3T2 930 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 DHX35Q9H5Z1 703 aaKnown RBP15.66■□□□□ 0.1
LINC01116-202ENST00000339037 RDH14Q9HBH5 336 aa15.66■□□□□ 0.1
LINC01116-202ENST00000339037 AKAP7Q9P0M2 348 aaPredicted RBP15.66■□□□□ 0.1
LINC01116-202ENST00000339037 A8MX80 341 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 C9orf172C9J069 976 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 DFFAO00273 331 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 TRAFD1O14545 582 aaPredicted RBP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 TEX33O43247 280 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 CPNE6O95741 557 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 MBD3O95983 291 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 MYCLP1P12525 358 aaPredicted RBP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 GM2AP17900 193 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 CDK11BP21127 795 aaKnown RBP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 PSMA2P25787 234 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 CD82P27701 267 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 SCNN1BP51168 640 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 AP1S1P61966 158 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 TYRO3Q06418 890 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 ILF3Q12906 894 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 C16orf72Q14CZ0 275 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 CA9Q16790 459 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 AMZ1Q400G9 498 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 PIM3Q86V86 326 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 DTX1Q86Y01 620 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 MCOLN2Q8IZK6 566 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 PSKH2Q96QS6 385 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 KCNK17Q96T54 332 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 TRIM4Q9C037 500 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 SUDS3Q9H7L9 328 aaPredicted RBP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 CARS2Q9HA77 564 aaKnown RBP15.65■□□□□ 0.1
LINC01116-202ENST00000339037 STARD5Q9NSY2 213 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 TMEM63CQ9P1W3 806 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 SCN8AQ9UQD0 1980 aa15.65■□□□□ 0.1
LINC01116-202ENST00000339037 LRRC10BA6NIK2 292 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 RHPN2P1A8MT19 583 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 C3orf80F5H4A9 247 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ARHGAP6O43182 974 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ZW10O43264 779 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 CCDC172P0C7W6 258 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 SFTPCP11686 197 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 CCNB1P14635 433 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ERCC2P18074 760 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ALDH4A1P30038 563 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 MAZP56270 477 aaKnown RBP15.64■□□□□ 0.09
LINC01116-202ENST00000339037 B4GALNT1Q00973 533 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 IL10RBQ08334 325 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 MAMLD1Q13495 774 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 PPP6R3Q5H9R7 873 aaPredicted RBP15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ERMARDQ5T6L9 678 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ACAD10Q6JQN1 1059 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ARHGAP36Q6ZRI8 547 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 HEATR4Q86WZ0 1026 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ARHGAP12Q8IWW6 846 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 PELI3Q8N2H9 469 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 NPWQ8N729 165 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 GPBAR1Q8TDU6 330 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 NUS1Q96E22 293 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 SNRNP25Q9BV90 132 aaKnown RBP15.64■□□□□ 0.09
LINC01116-202ENST00000339037 GSDMCQ9BYG8 508 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 B3GNT4Q9C0J1 378 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 PHPT1Q9NRX4 125 aaPredicted RBP15.64■□□□□ 0.09
LINC01116-202ENST00000339037 SPATS2LQ9NUQ6 558 aaKnown RBP15.64■□□□□ 0.09
LINC01116-202ENST00000339037 PARVAQ9NVD7 372 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 B4GALT6Q9UBX8 382 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 SEPT3Q9UH03 358 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 PCSK1NQ9UHG2 260 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 RELNP78509 3460 aa15.64■□□□□ 0.09
LINC01116-202ENST00000339037 ARHGEF17Q96PE2 2063 aaPredicted RBP15.63■□□□□ 0.09
LINC01116-202ENST00000339037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.63■□□□□ 0.09
LINC01116-202ENST00000339037 STMND1H3BQB6 276 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 HGSO14964 777 aaPredicted RBP15.63■□□□□ 0.09
LINC01116-202ENST00000339037 RENBPP51606 427 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 OR1D5P58170 312 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 BIRC2Q13490 618 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 TBR1Q16650 682 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 CLPPQ16740 277 aaPredicted RBP15.63■□□□□ 0.09
LINC01116-202ENST00000339037 ANO6Q4KMQ2 910 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 TMCO4Q5TGY1 634 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 PPP1R2P3Q6NXS1 205 aa15.63■□□□□ 0.09
LINC01116-202ENST00000339037 ATG14Q6ZNE5 492 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms