RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 FETUBQ9UGM5 382 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 CTPS1P17812 591 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PSMD5Q16401 504 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 GPR158Q5T848 1215 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 DCAF12L1Q5VU92 463 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 GPR142Q7Z601 462 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 CCDC185Q8N715 623 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PSMA8Q8TAA3 256 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 QRFPRQ96P65 431 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 CCDC3Q9BQI4 270 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 SLC15A5A6NIM6 579 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 KPNA5O15131 536 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PMM2O15305 246 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 DHX15O43143 795 aaKnown RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 PEX2P28328 305 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 NRG1Q02297 640 aaPredicted RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 RALGPS1Q5JS13 557 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 OR2T34Q8NGX1 318 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PHF10Q8WUB8 498 aaKnown RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 TSPAN18Q96SJ8 248 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 COPS8Q99627 209 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 TMPRSS4Q9NRS4 437 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 TMEM59LQ9UK28 342 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 LRIG2O94898 1065 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 LRATO95237 230 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 COX10Q12887 443 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PEX6Q13608 980 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 LSM12Q3MHD2 195 aaKnown RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 GLYATQ6IB77 296 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 DOK6Q6PKX4 331 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 KLHL17Q6TDP4 642 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 CACUL1Q86Y37 369 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 PDZD7Q9H5P4 517 aa13.76□□□□□ -0.21
RTN4-202ENST00000337526 WRAP73Q9P2S5 460 aaPredicted RBP13.76□□□□□ -0.21
RTN4-202ENST00000337526 DYRK3O43781 588 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 CSH1P0DML2 217 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 CSH2P0DML3 217 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 POLR2EP19388 210 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 MPP1Q00013 466 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 STX4Q12846 297 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 SGCGQ13326 291 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 VPS26BQ4G0F5 336 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 RHBDF2Q6PJF5 856 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 RD3Q7Z3Z2 195 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 DEPDC4Q8N2C3 294 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 OR4K2Q8NGD2 314 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 WDR48Q8TAF3 677 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 FAM81AQ8TBF8 368 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 GPR152Q8TDT2 470 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ABCG8Q9H221 673 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 GBA3Q9H227 469 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 RAD18Q9NS91 495 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TIMM22Q9Y584 194 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 PRMT5O14744 637 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 PDE9AO76083 593 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 PKMP14618 531 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 ADSLP30566 484 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 TUSC3Q13454 348 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ZNF438Q7Z4V0 828 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 GPR156Q8NFN8 814 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 PTCD2Q8WV60 388 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 SLCO2A1Q92959 643 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TRIM63Q969Q1 353 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 UBE2E3Q969T4 207 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TBATAQ96M53 351 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ADGRE2Q9UHX3 823 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 RAB26Q9ULW5 256 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 POMPQ9Y244 141 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 STX11O75558 287 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ENPEPQ07075 957 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 RFWD3Q6PCD5 774 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ZYG11AQ6WRX3 759 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 LDB1Q86U70 411 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 POP5Q969H6 163 aaKnown RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
RTN4-202ENST00000337526 ENTPD4Q9Y227 616 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 POLR3HQ9Y535 204 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 TBL1XO60907 577 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 BMP10O95393 424 aa13.75□□□□□ -0.21
RTN4-202ENST00000337526 ZBTB11O95625 1053 aaPredicted RBP13.75□□□□□ -0.21
RTN4-202ENST00000337526 ITGA2P17301 1181 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms