RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 GPAMQ9HCL2 828 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 TXLNGQ9NUQ3 528 aa12.46□□□□□ -0.42
ZNF548-201ENST00000336128 INTS10Q9NVR2 710 aaKnown RBP12.46□□□□□ -0.42
ZNF548-201ENST00000336128 NEDD8-MDP1E9PL57 170 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 STX7O15400 261 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF821O75541 412 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 HSPA4LO95757 839 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 POU2F2P09086 479 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 LTA4HP09960 611 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 HOXB8P17481 243 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 CTPS1P17812 591 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PMLP29590 882 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 HLA-FP30511 346 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 SKIV2L2P42285 1042 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 MAPK8P45983 427 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 STK19P49842 368 aaPredicted RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PRKAA2P54646 552 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 DGKKQ5KSL6 1271 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 LIPMQ5VYY2 423 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PDE12Q6L8Q7 609 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 CLNKQ7Z7G1 428 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PIWIL2Q8TC59 973 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PIH1D2Q8WWB5 315 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 MRPL57Q9BQC6 102 aaKnown RBP12.45□□□□□ -0.42
ZNF548-201ENST00000336128 SIKE1Q9BRV8 207 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 BBS2Q9BXC9 721 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 BPIFA1Q9NP55 256 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 HCFC2Q9Y5Z7 792 aa12.45□□□□□ -0.42
ZNF548-201ENST00000336128 A0A0U1RQS6 177 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 DLX3O60479 287 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 SRCP12931 536 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 GKP32189 559 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 MC4RP32245 332 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 FAM83EQ2M2I3 478 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TECRLQ5HYJ1 363 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 AGAP9Q5VTM2 703 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ADGRD2Q7Z7M1 963 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 RBM23Q86U06 439 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ALYREFQ86V81 257 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 PIM3Q86V86 326 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 WDR75Q8IWA0 830 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 RYBPQ8N488 228 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 IRF7Q92985 503 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 PRR11Q96HE9 360 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 SAMD11Q96NU1 681 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 AARSD1Q9BTE6 412 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 HTATIP2Q9BUP3 242 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 GBF1Q92538 1859 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 CXorf51AA0A1B0GTR3 108 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 FCHO1O14526 889 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TRAFD1O14545 582 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ZNF197O14709 1029 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 HTRA2O43464 458 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ATP5HO75947 161 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 UNC5CO95185 931 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ALPIP09923 528 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 CCDC166P0CW27 439 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 BMP1P13497 986 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TCF3P15923 654 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TARSP26639 723 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 RPL26P61254 145 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ERVK-21P61565 698 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 KLC3Q6P597 504 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 C22orf39Q6P5X5 142 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TMEM207Q6UWW9 146 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 SGF29Q96ES7 293 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 UBXN10Q96LJ8 280 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 LINC00597Q9H2U6 94 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 ATP13A3Q9H7F0 1226 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 MAGEE1Q9HCI5 957 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 SLC40A1Q9NP59 571 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 SPHK2Q9NRA0 654 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TBC1D14Q9P2M4 693 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 DPP7Q9UHL4 492 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 RPL26L1Q9UNX3 145 aaKnown RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 TRIM33Q9UPN9 1127 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 MTF2Q9Y483 593 aaPredicted RBP12.44□□□□□ -0.42
ZNF548-201ENST00000336128 WNT6Q9Y6F9 365 aa12.44□□□□□ -0.42
ZNF548-201ENST00000336128 UBA6A0AVT1 1052 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SOCS5O75159 536 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 CBX6O95503 412 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PABPC1P11940 636 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 CDKN1CP49918 316 aaPredicted RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 SUOXP51687 545 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 PFKPQ01813 784 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 ASPHQ12797 758 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 MAVSQ7Z434 540 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
ZNF548-201ENST00000336128 OR2AP1Q8NGE2 309 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 TCF12Q99081 682 aa12.43□□□□□ -0.42
ZNF548-201ENST00000336128 GPR63Q9BZJ6 419 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms