RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 HMGCLP35914 325 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ELK3P41970 407 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 STC1P52823 247 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CSTF1Q05048 431 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 LAMB3Q13751 1172 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CBARPQ8N350 705 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CXorf40AQ8TE69 158 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 LRRC39Q96DD0 335 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 STAMBPL1Q96FJ0 436 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 WDR83Q9BRX9 315 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 KIFC1Q9BW19 673 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PREBQ9HCU5 417 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 WSB2Q9NYS7 404 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 SAMD15Q9P1V8 674 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 RAB21Q9UL25 225 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 SOX13Q9UN79 622 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CCDC78A2IDD5 438 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 GPR37L1O60883 481 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 SEMA4FO95754 770 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 C1SP09871 688 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM153BP0C7A2 387 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 LPOP22079 712 aaPredicted RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FNTBP49356 437 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PDE1BQ01064 536 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 PTPRCAPQ14761 206 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM153CQ494X1 144 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 USP39Q53GS9 565 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 NEK5Q6P3R8 708 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CEP128Q6ZU80 1094 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 NLRP9Q7RTR0 991 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 HSD11B1LQ7Z5J1 315 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ANKMY2Q8IV38 441 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 OR2T34Q8NGX1 318 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 ZNF778Q96MU6 729 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 MRM3Q9HC36 420 aaKnown RBP13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 BPIFA1Q9NP55 256 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 IL17CQ9P0M4 197 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 FBXO4Q9UKT5 387 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 INVSQ9Y283 1065 aa13.72□□□□□ -0.21
TUBA1B-202ENST00000336023 NUMA1Q14980 2115 aa13.71□□□□□ -0.21
TUBA1B-202ENST00000336023 FAM237BA0A1B0GVD1 139 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 A0A1W2PQU0 124 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 IGLON5A6NGN9 336 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 PRR33A8MZF0 331 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 PSMD11O00231 422 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 STX7O15400 261 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 RNGTTO60942 597 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 C6P13671 934 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 MAGEA4P43358 317 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 ZNF140P52738 457 aaPredicted RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 RPS21P63220 83 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 ACOX1Q15067 660 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 SEL1L3Q68CR1 1132 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 KIAA1161Q6NSJ0 714 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 CES3Q6UWW8 571 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 HORMAD1Q86X24 394 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 FBXO36Q8NEA4 188 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 OR4K2Q8NGD2 314 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 OR13C4Q8NGS5 318 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 STYXQ8WUJ0 223 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 DNAJC1Q96KC8 554 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 SPACA7Q96KW9 195 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 NAT9Q9BTE0 207 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 GPR174Q9BXC1 333 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 SLC2A6Q9UGQ3 507 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 ZC3H7BQ9UGR2 993 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 COQ6Q9Y2Z9 468 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 PKP3Q9Y446 797 aa13.71□□□□□ -0.22
TUBA1B-202ENST00000336023 LZTS3O60299 673 aaPredicted RBP13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 GM2AP17900 193 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 PGAM1P18669 254 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 NMBRP28336 390 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 ETV3P41162 512 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 SPINT3P49223 89 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 TMPRSS15P98073 1019 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 SKIDA1Q1XH10 827 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 ANKRD20A4Q4UJ75 823 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 TMEM259Q4ZIN3 620 aa13.7□□□□□ -0.22
TUBA1B-202ENST00000336023 ESRP1Q6NXG1 681 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms