RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SEC31AO94979 1220 aaKnown RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 GM2AP17900 193 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 MAOBP27338 520 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 STC1P52823 247 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ITGA8P53708 1063 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SESN2P58004 480 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 POU6F1Q14863 301 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 GLE1Q53GS7 698 aaKnown RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 SETMARQ53H47 684 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 CERCAMQ5T4B2 595 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HIBCHQ6NVY1 386 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ZNF534Q76KX8 674 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 TMC3Q7Z5M5 1100 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 HOOK3Q86VS8 718 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 RGL4Q8IZJ4 473 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 CBARPQ8N350 705 aaPredicted RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 LRRN4CLQ8ND94 238 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 BRSK1Q8TDC3 778 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 COQ10AQ96MF6 247 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 EPC1Q9H2F5 836 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 EBF2Q9HAK2 575 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 FAM86C1Q9NVL1 165 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 EIF2B4Q9UI10 523 aaKnown RBP14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 ANAPC5Q9UJX4 755 aa14.09□□□□□ -0.15
APOBEC3B-202ENST00000335760 TRPM6Q9BX84 2022 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 AP3B1O00203 1094 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 NDC80O14777 642 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 WNT9AO14904 365 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 BUD23O43709 281 aaKnown RBP14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 RECQL5O94762 991 aaPredicted RBP14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 CD27P26842 260 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 NUDT1P36639 197 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 ETV3P41162 512 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 MTM1Q13496 603 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 SEPT6Q14141 434 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 MORF4L2Q15014 288 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 WDR45BQ5MNZ6 344 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 RFLNAQ6ZTI6 216 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 Q6ZVL8 140 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 CAND1Q86VP6 1230 aaKnown RBP14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 TTC30BQ8N4P2 665 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 BBOF1Q8ND07 529 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 ASB12Q8WXK4 309 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 EID2BQ96D98 161 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 MYOCQ99972 504 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 ORAI3Q9BRQ5 295 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 C1QTNF7Q9BXJ2 289 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 MIR1-1HGQ9H1L0 117 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 XAB2Q9HCS7 855 aaKnown RBP14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 BPIFA1Q9NP55 256 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 FZD3Q9NPG1 666 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 PKD2L2Q9NZM6 624 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAB23Q9ULC3 237 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
APOBEC3B-202ENST00000335760 MYLKQ15746 1914 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 DOCK9Q9BZ29 2069 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 RAD51BO15315 384 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 AVILO75366 819 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 CRTAMO95727 393 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 HNRNPA2B1P22626 353 aaKnown RBP14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 ITPKAP23677 461 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 MGAT1P26572 445 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 AKT2P31751 481 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 NPY2RP49146 381 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 SPINT3P49223 89 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 GUCY2DQ02846 1103 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 CREB5Q02930 508 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 CALCOCO2Q13137 446 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 TAF1AQ15573 450 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 CCDC38Q502W7 563 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 TECPR1Q7Z6L1 1165 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 DNASE2BQ8WZ79 361 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 NUS1Q96E22 293 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 DTD2Q96FN9 168 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 SERAC1Q96JX3 654 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 SERPINB12Q96P63 405 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 LENG8Q96PV6 779 aaPredicted RBP14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 BFARQ9NZS9 450 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 WHRNQ9P202 907 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 CD84Q9UIB8 345 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 DMTF1Q9Y222 760 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 KCTD3Q9Y597 815 aa14.07□□□□□ -0.16
APOBEC3B-202ENST00000335760 ATXN2Q99700 1313 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 PLXNA2O75051 1894 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 TNRC6BQ9UPQ9 1833 aaKnown RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 PRAMEF26H0Y7S4 382 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 SMAPO00193 183 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 LDB2O43679 373 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 MLNP12872 115 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 LPOP22079 712 aaPredicted RBP14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 HMGCLP35914 325 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 CRADDP78560 199 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 LRRC14Q15048 493 aa14.06□□□□□ -0.16
APOBEC3B-202ENST00000335760 AGERQ15109 404 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms