RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SRPK1Q96SB4 655 aaKnown RBP21.53■■□□□ 1.04
TPM1-204ENST00000334895 C1QTNF1Q9BXJ1 281 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 GPR63Q9BZJ6 419 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 VPS37BQ9H9H4 285 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 ZFYVE1Q9HBF4 777 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 DLGAP2Q9P1A6 1054 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 ZNF318Q5VUA4 2279 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 PI15O43692 258 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 RNASEH2AO75792 299 aaKnown RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 C1QAP02745 245 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 CYP2A6P11509 494 aaPredicted RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 TSHRP16473 764 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 LPOP22079 712 aaPredicted RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 HMGCLP35914 325 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 SUOXP51687 545 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 ARSDP51689 593 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 PTSQ03393 145 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 ZBTB16Q05516 673 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 MTAPQ13126 283 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 SLC29A2Q14542 456 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 TMEM31Q5JXX7 168 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 SPANXN3Q5MJ09 141 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 SPDYCQ5MJ68 293 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 ERAP2Q6P179 960 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 NLRP9Q7RTR0 991 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 BMP8AQ7Z5Y6 402 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 SPEM1Q8N4L4 309 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 OR4K2Q8NGD2 314 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 UHMK1Q8TAS1 419 aaKnown RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 GSDMBQ8TAX9 411 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 HMGB4Q8WW32 186 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 HHIPQ96QV1 700 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 POLMQ9NP87 494 aaPredicted RBP21.52■■□□□ 1.04
TPM1-204ENST00000334895 FBXL12Q9NXK8 326 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 IL1RAPL1Q9NZN1 696 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 IL17CQ9P0M4 197 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 RIMKLBQ9ULI2 386 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 FADS3Q9Y5Q0 445 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 FAM169AQ9Y6X4 670 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 LRRK1Q38SD2 2015 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 BPTFQ12830 3046 aa21.52■■□□□ 1.04
TPM1-204ENST00000334895 TCRBV9S1A1TA0A576 114 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 C2orf81A6NN90 581 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 PRR33A8MZF0 331 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 C1SP09871 688 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 SMAD1Q15797 465 aaKnown RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 KIAA1324Q6UXG2 1013 aaKnown RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 STYXQ8WUJ0 223 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 PEX13Q92968 403 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 RAB7BQ96AH8 199 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 FUT8Q9BYC5 575 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 BPIFA1Q9NP55 256 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 NLE1Q9NVX2 485 aaPredicted RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 ZNF106Q9H2Y7 1883 aaKnown RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 ALDH1A2O94788 518 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 ABHD2P08910 425 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 ARCN1P48444 511 aaKnown RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 STC1P52823 247 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 TMPRSS15P98073 1019 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 LAMB3Q13751 1172 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 CBARPQ8N350 705 aaPredicted RBP21.51■■□□□ 1.03
TPM1-204ENST00000334895 FBXL6Q8N531 539 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.51■■□□□ 1.03
TPM1-204ENST00000334895 OMDQ99983 421 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 MOCS1Q9NZB8 636 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 EBF1Q9UH73 591 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 SCML1Q9UN30 329 aa21.51■■□□□ 1.03
TPM1-204ENST00000334895 NUMA1Q14980 2115 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 GSTA2P09210 222 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 ZNF30P17039 623 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 ELP6Q0PNE2 266 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 FRG1Q14331 258 aaKnown RBP21.5■■□□□ 1.03
TPM1-204ENST00000334895 TTC31Q49AM3 519 aaPredicted RBP21.5■■□□□ 1.03
TPM1-204ENST00000334895 TMEM52BQ4KMG9 183 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 KIAA0930Q6ICG6 404 aaPredicted RBP21.5■■□□□ 1.03
TPM1-204ENST00000334895 ANO7Q6IWH7 933 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 LIPIQ6XZB0 460 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 RFLNAQ6ZTI6 216 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 HSD11B1LQ7Z5J1 315 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 TSTD1Q8NFU3 115 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 FBF1Q8TES7 1133 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 TBATAQ96M53 351 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 SUDS3Q9H7L9 328 aaPredicted RBP21.5■■□□□ 1.03
TPM1-204ENST00000334895 SMYD2Q9NRG4 433 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 ZNF446Q9NWS9 450 aa21.5■■□□□ 1.03
TPM1-204ENST00000334895 STX7O15400 261 aaKnown RBP21.49■■□□□ 1.03
TPM1-204ENST00000334895 AP1G1O43747 822 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 SPAG6O75602 509 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 PIAS1O75925 651 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 SHBGP04278 402 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 GM2AP17900 193 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 AOC1P19801 751 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 NFKBIAP25963 317 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 TPMTP51580 245 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 PDE1BQ01064 536 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 ARHGEF7Q14155 803 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 CASP8Q14790 479 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 SKIDA1Q1XH10 827 aa21.49■■□□□ 1.03
TPM1-204ENST00000334895 USP30Q70CQ3 517 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms