RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ATP6V1C1P21283 382 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 CACNG1Q06432 222 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 FAM98BQ52LJ0 330 aaKnown RBP15.02■□□□□ -0
C9orf47-201ENST00000334490 HECTD2Q5U5R9 776 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 TTC33Q6PID6 262 aaPredicted RBP15.02■□□□□ -0
C9orf47-201ENST00000334490 KCTD13Q8WZ19 329 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 ACDQ96AP0 544 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 TEKT5Q96M29 485 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 POLMQ9NP87 494 aaPredicted RBP15.02■□□□□ -0
C9orf47-201ENST00000334490 DNAJB4Q9UDY4 337 aa15.02■□□□□ -0
C9orf47-201ENST00000334490 C15orf38-AP3S2A0A0A6YYH1 394 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 ATP6AP2A0A1C7CYW4 349 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 ATP6AP2O75787 350 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 FSBPO95073 299 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 KCNQ1P51787 676 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 HADHBP55084 474 aaKnown RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 SNAP47Q5SQN1 464 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 LIPMQ5VYY2 423 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 TTC27Q6P3X3 843 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 ARPINQ7Z6K5 226 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 EXOC3L1Q86VI1 746 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 CDK20Q8IZL9 346 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 GFM2Q969S9 779 aaKnown RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 EMID1Q96A84 441 aaPredicted RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 IGSF21Q96ID5 467 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 RAD9AQ99638 391 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 NOD2Q9HC29 1040 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 STYXL1Q9Y6J8 313 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 EPN2O95208 641 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 HOXD13P35453 343 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 RPL38P63173 70 aaKnown RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 AP5B1Q2VPB7 878 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 ARCQ7LC44 396 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 APTXQ7Z2E3 356 aaKnown RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 ZBED3Q96IU2 234 aaPredicted RBP15.02□□□□□ -0.01
C9orf47-201ENST00000334490 TPD52L3Q96J77 140 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 C8orf48Q96LL4 319 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 CDRT15Q96T59 188 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 TCAF1Q9Y4C2 921 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 KDM3BQ7LBC6 1761 aa15.02□□□□□ -0.01
C9orf47-201ENST00000334490 MTMR11A4FU01 709 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CBX6O95503 412 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 VIPP01282 170 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SCNN1AP37088 669 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 IRX1P78414 480 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 PDGFRLQ15198 375 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 GRASPQ7Z6J2 395 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 DHFR2Q86XF0 187 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RIN3Q8TB24 985 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 WFIKKN2Q8TEU8 576 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SLC35F5Q8WV83 523 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 INVSQ9Y283 1065 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 HGFP14210 728 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 GTF2E2P29084 291 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CCR4P51679 360 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SEMA5AQ13591 1074 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 TCHHL1Q5QJ38 904 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ANKRD22Q5VYY1 191 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CYB5D1Q6P9G0 228 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CCDC81Q6ZN84 652 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 PARGQ86W56 976 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 C17orf64Q86WR6 236 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 GALNT13Q8IUC8 556 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RDH11Q8TC12 318 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 DNAJC1Q96KC8 554 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 MARK4Q96L34 752 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 TRMT61BQ9BVS5 477 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 TDP1Q9NUW8 608 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 INSL5Q9Y5Q6 135 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 HDAC3O15379 428 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RASGRP1O95267 797 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RGS1Q08116 209 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ILF3Q12906 894 aaKnown RBP eCLIP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 TRMT5Q32P41 509 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ESRP1Q6NXG1 681 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 AGMOQ6ZNB7 445 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ZBTB49Q6ZSB9 765 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 TRABD2AQ86V40 505 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 MYCBPQ99417 103 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 GPR21Q99679 349 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RAP2CQ9Y3L5 183 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 MAP2K7O14733 419 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 AZIN1O14977 448 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ERAL1O75616 437 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ASLP04424 464 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 IQCF3P0C7M6 154 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 GJA5P36382 358 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 RAD23AP54725 363 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CRELD2Q6UXH1 353 aaPredicted RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 CYP2R1Q6VVX0 501 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SMOQ99835 787 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 YIPF3Q9GZM5 350 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 PCDH12Q9NPG4 1184 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SQORQ9Y6N5 450 aa15.01□□□□□ -0.01
C9orf47-201ENST00000334490 SNTNA6NMZ2 147 aa15□□□□□ -0.01
C9orf47-201ENST00000334490 ME2P23368 584 aa15□□□□□ -0.01
C9orf47-201ENST00000334490 GABRB2P47870 512 aa15□□□□□ -0.01
C9orf47-201ENST00000334490 RNASEH2BQ5TBB1 312 aaKnown RBP15□□□□□ -0.01
C9orf47-201ENST00000334490 CAPN13Q6MZZ7 669 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms