RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 SPATA13Q96N96 652 aa11.9□□□□□ -0.51
LIMK2-202ENST00000333611 GATA5Q9BWX5 397 aaPredicted RBP11.9□□□□□ -0.51
LIMK2-202ENST00000333611 ILKAPQ9H0C8 392 aaPredicted RBP11.9□□□□□ -0.51
LIMK2-202ENST00000333611 FKBP14Q9NWM8 211 aa11.9□□□□□ -0.51
LIMK2-202ENST00000333611 BFARQ9NZS9 450 aa11.9□□□□□ -0.51
LIMK2-202ENST00000333611 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 HDAC3O15379 428 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 C2P06681 752 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 ACAT1P24752 427 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 PLIN5Q00G26 463 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 TARBP2Q15633 366 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 TREML2Q5T2D2 321 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 BROXQ5VW32 411 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 METTL7BQ6UX53 244 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 RPS27LQ71UM5 84 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 PIGZQ86VD9 579 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 DHFR2Q86XF0 187 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 OR8H2Q8N162 312 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 TP53I13Q8NBR0 393 aaPredicted RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 MED30Q96HR3 178 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 MROQ9BYG7 248 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 BCO2Q9BYV7 579 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 WDR12Q9GZL7 423 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 NMRAL1Q9HBL8 299 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 PADI4Q9UM07 663 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 CITO14578 2027 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 KPNA7A9QM74 516 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 HNRNPCL2B2RXH8 293 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 TRIM13O60858 407 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 RFPL2O75678 378 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 CYP7B1O75881 506 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 IL18RAPO95256 599 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 UGT2B4P06133 528 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 ARF4P18085 180 aaPredicted RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 PGAM1P18669 254 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 TSPAN8P19075 237 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 CES1P23141 567 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 IL12AP29459 219 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 SPRP35270 261 aaPredicted RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 SNRPD2P62316 118 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 SEL1L3Q68CR1 1132 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 CTU1Q7Z7A3 348 aaKnown RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 CARM1Q86X55 608 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 DEFB106AQ8N104 65 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 KCTD4Q8WVF5 259 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 FAR1Q8WVX9 515 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 DLG3Q92796 817 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 ATP13A3Q9H7F0 1226 aa11.89□□□□□ -0.51
LIMK2-202ENST00000333611 GBA2Q9HCG7 927 aaPredicted RBP11.89□□□□□ -0.51
LIMK2-202ENST00000333611 LOC105371267A0A1B0GV96 52 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 M0QYT0 321 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 NUAK1O60285 661 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ACSL4O60488 711 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 PIM1P11309 404 aaPredicted RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 BMPR1AP36894 532 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 GRIA4P48058 902 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 CLK1P49759 484 aaKnown RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 SLC7A2P52569 658 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 SLC12A2P55011 1212 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 UBE3AQ05086 875 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ENPEPQ07075 957 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 TUBA3EQ6PEY2 450 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 CAMK1DQ8IU85 385 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ADAMTS16Q8TE57 1224 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 RMDN1Q96DB5 314 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 CELF6Q96J87 481 aaKnown RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 FCRL3Q96P31 734 aaPredicted RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 TCF12Q99081 682 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ZNF670Q9BS34 389 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 LHPPQ9H008 270 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ATXN3LQ9H3M9 355 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 NANOGQ9H9S0 305 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 PRDM8Q9NQV8 689 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 TRMT13Q9NUP7 481 aaKnown RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 GMIPQ9P107 970 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 RUVBL2Q9Y230 463 aaKnown RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 PCM1Q15154 2024 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ATP6AP2A0A1C7CYW4 349 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ATP6AP2O75787 350 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 GSRP00390 522 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 TP53P04637 393 aaPredicted RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 JUNP05412 331 aaKnown RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 INSRRP14616 1297 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 HNRNPLP14866 589 aaKnown RBP eCLIP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 TTKP33981 857 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 SERPINB10P48595 397 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 P2RX3P56373 397 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 IFITM3Q01628 133 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
LIMK2-202ENST00000333611 ARL13AQ5H913 290 aaPredicted RBP11.88□□□□□ -0.51
LIMK2-202ENST00000333611 NCBP2-AS2Q69YL0 99 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms