RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TMEM63AO94886 807 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 PRLP01236 227 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 ATXN1LP0C7T5 689 aaKnown RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SKIV2L2P42285 1042 aaKnown RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 RGRP47804 291 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SOX9P48436 509 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 DGKEP52429 567 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 GPX6P59796 221 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SIGLEC14Q08ET2 396 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 MGAT5Q09328 741 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 ELP6Q0PNE2 266 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 NAB1Q13506 487 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 WLSQ5T9L3 541 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 EGFLAMQ63HQ2 1017 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 STEAP4Q687X5 459 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF776Q68DI1 518 aaPredicted RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 Q6ZVU0 165 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 USP45Q70EL2 814 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 ZNF534Q76KX8 674 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SYT13Q7L8C5 426 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 NLRP8Q86W28 1048 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 CHPFQ8IZ52 775 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 IL17RCQ8NAC3 791 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 IPMKQ8NFU5 416 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SPATA22Q8NHS9 363 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 LRRC8CQ8TDW0 803 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 PYROXD1Q8WU10 500 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 PIH1D2Q8WWB5 315 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 MRRFQ96E11 262 aaKnown RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SCRN2Q96FV2 425 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 SIGLEC10Q96LC7 697 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 FAM129BQ96TA1 746 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 EBNA1BP2Q99848 306 aaKnown RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 FICDQ9BVA6 458 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 NFKBIL1Q9UBC1 381 aaPredicted RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 EVLQ9UI08 416 aaPredicted RBP9.52□□□□□ -0.88
C11orf54-201ENST00000331239 TEX264Q9Y6I9 313 aa9.52□□□□□ -0.88
C11orf54-201ENST00000331239 TCF20Q9UGU0 1960 aaKnown RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 TYROBPO43914 113 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 PMPCBO75439 489 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 MT-CYBP00156 380 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 EZRP15311 586 aaKnown RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 PGAM1P18669 254 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 HOXA6P31267 233 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 RPA3P35244 121 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 MAXP61244 160 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 MSLNQ13421 630 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 TAF1AQ15573 450 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 SIRPB2Q5JXA9 342 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 SPANXN3Q5MJ09 141 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 HHATQ5VTY9 493 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 NEK5Q6P3R8 708 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 KBTBD6Q86V97 674 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 CBARPQ8N350 705 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 PPHLN1Q8NEY8 458 aaKnown RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 EZH1Q92800 747 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 EDAQ92838 391 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 CEP41Q9BYV8 373 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 ACSS3Q9H6R3 686 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 FBRSL1Q9HCM7 1045 aaKnown RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 SSU72Q9NP77 194 aaKnown RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
C11orf54-201ENST00000331239 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 FZD4Q9ULV1 537 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 SOX13Q9UN79 622 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 TTLL3Q9Y4R7 772 aa9.52□□□□□ -0.89
C11orf54-201ENST00000331239 A0A0J9YYE9 177 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 MROH6A6NGR9 719 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 CAPN8A6NHC0 703 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SIN3BO75182 1162 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 USP1O94782 785 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ZWINTO95229 277 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 IGLV3-19P01714 112 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TRBC1P01850 177 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 EPHX1P07099 455 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 PAMP19021 973 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 PRKCHP24723 683 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 SSTR1P30872 391 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ACVR1Q04771 509 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TRAF2Q12933 501 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 EFTUD2Q15029 972 aaKnown RBP eCLIP9.51□□□□□ -0.891e-8■■■■□ 20.3
C11orf54-201ENST00000331239 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 FNBP1LQ5T0N5 605 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ATXN7L2Q5T6C5 722 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 PKN3Q6P5Z2 889 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TMEM135Q86UB9 458 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 RYBPQ8N488 228 aaPredicted RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 DNAAF3Q8N9W5 541 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TTC8Q8TAM2 541 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 ASB12Q8WXK4 309 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 PAFAH2Q99487 392 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 WDR83Q9BRX9 315 aaKnown RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 TACO1Q9BSH4 297 aaKnown RBP9.51□□□□□ -0.89
C11orf54-201ENST00000331239 DHRS4Q9BTZ2 278 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 CHRDQ9H2X0 955 aa9.51□□□□□ -0.89
C11orf54-201ENST00000331239 DYRK4Q9NR20 520 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms