RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RB1P06400 928 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 GFAPP14136 432 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 GP5P40197 560 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 CDKN1CP49918 316 aaPredicted RBP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ZNF135P52742 658 aaPredicted RBP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 USP4Q13107 963 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 GRM3Q14832 879 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 PTPRNQ16849 979 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 PACS1Q6VY07 963 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 SNX19Q92543 992 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 LRCH3Q96II8 777 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 EGFL8Q99944 293 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ATP13A3Q9H7F0 1226 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDGFB-201ENST00000331163 COQ6Q9Y2Z9 468 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 A6NHS1 94 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 MC4RP32245 332 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 PSMD8P48556 350 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 RPS6KA3P51812 740 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 TAZQ16635 292 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 PKN3Q6P5Z2 889 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 NLRP9Q7RTR0 991 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 CCDC134Q9H6E4 229 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 ITM2BQ9Y287 266 aa15.91■□□□□ 0.14
PDGFB-201ENST00000331163 CRTAMO95727 393 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 IGLV3-25P01717 112 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 TPSB2P20231 275 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 PPP3CCP48454 512 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 NPY2RP49146 381 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 ARF5P84085 180 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 ITGA9Q13797 1035 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 TPSAB1Q15661 275 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 CWF19L1Q69YN2 538 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 KIAA1324Q6UXG2 1013 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 RPS27LQ71UM5 84 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 PIM3Q86V86 326 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 NPAS3Q8IXF0 933 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 CELF5Q8N6W0 485 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 MYO19Q96H55 970 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 FCRL5Q96RD9 977 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 TBC1D14Q9P2M4 693 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 STOML1Q9UBI4 398 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 SLC9A3R1O14745 358 aaPredicted RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 PSMD3O43242 534 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 AHCYL1O43865 530 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 HOXD9P28356 352 aaPredicted RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 IRF9Q00978 393 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 HSPA14Q0VDF9 509 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 ZNF789Q5FWF6 425 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 FYB2Q5VWT5 728 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 LILRA6Q6PI73 481 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 TSPAN33Q86UF1 283 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 TEX9Q8N6V9 391 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 B4GALNT2Q8NHY0 566 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 SREK1Q8WXA9 508 aaKnown RBP15.9■□□□□ 0.14
PDGFB-201ENST00000331163 SCAMP4Q969E2 229 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 ARMCX1Q9P291 453 aa15.9■□□□□ 0.14
PDGFB-201ENST00000331163 FAM95CA0A1B0GW59 222 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 SH3BGRLO75368 114 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 HSPA4LO95757 839 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 STMN1P16949 149 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 CDK16Q00536 496 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 MESP2Q0VG99 397 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 TRAF2Q12933 501 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 MRNIPQ6NTE8 343 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 TRIM74Q86UV6 250 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 PHC3Q8NDX5 983 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 CCDC162PA2VCL2 907 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 BHMG1C9JSJ3 638 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 DCTN3O75935 186 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 NDST3O95803 873 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 GOT2P00505 430 aaKnown RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 CD151P48509 253 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 FSTL4Q6MZW2 842 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 RIN3Q8TB24 985 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 SMARCD2Q92925 531 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 MYRFLQ96LU7 910 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 GVINP1Q7Z2Y8 2422 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 CCDC160A6NGH7 325 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 NCF2P19878 526 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 SLC1A2P43004 574 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 PXNP49023 591 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 RBM20Q5T481 1227 aaKnown RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 ZNF648Q5T619 568 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 PARM1Q6UWI2 310 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 HIPK4Q8NE63 616 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 ACVR1CQ8NER5 493 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 ACOX2Q99424 681 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 TRMT61BQ9BVS5 477 aaKnown RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.89■□□□□ 0.13
PDGFB-201ENST00000331163 SPO11Q9Y5K1 396 aa15.89■□□□□ 0.13
PDGFB-201ENST00000331163 KLHL33A6NCF5 533 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 NEMP2A6NFY4 417 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 OR2AG2A6NM03 316 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 FESP07332 822 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 CCDC166P0CW27 439 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 TRABD2AQ86V40 505 aa15.88■□□□□ 0.13
PDGFB-201ENST00000331163 CHFRQ96EP1 664 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms