RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CDKN1CP49918 316 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 SLC20A2Q08357 652 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 GRASPQ7Z6J2 395 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 TTC7BQ86TV6 843 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 TTC8Q8TAM2 541 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 ZNF707Q96C28 371 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 EID2BQ96D98 161 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 EBF4Q9BQW3 602 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 RASSF4Q9H2L5 321 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 MRPL46Q9H2W6 279 aaKnown RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 TLE6Q9H808 572 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 GPAMQ9HCL2 828 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 BPIFA1Q9NP55 256 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 SAR1AQ9NR31 198 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 POLR3BQ9NW08 1133 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 HAO1Q9UJM8 370 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 SOBPA7XYQ1 873 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 FCHO1O14526 889 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 H2AFYO75367 372 aaKnown RBP16.96■□□□□ 0.3
DDX41-201ENST00000330503 CBX6O95503 412 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 SLC4A1P02730 911 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 CTPS1P17812 591 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 KCNJ2P63252 427 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 ZBTB16Q05516 673 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 C9orf50Q5SZB4 431 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 ARMC12Q5T9G4 340 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 FAM45BPQ6NSW5 357 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 AFTPHQ6ULP2 937 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 PIM3Q86V86 326 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 FAM45AQ8TCE6 357 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 RPL10LQ96L21 214 aaKnown RBP16.96■□□□□ 0.3
DDX41-201ENST00000330503 TNKS2Q9H2K2 1166 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 TXLNGQ9NUQ3 528 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 ARL8BQ9NVJ2 186 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 FKBPLQ9UIM3 349 aa16.96■□□□□ 0.3
DDX41-201ENST00000330503 HTRA2O43464 458 aaPredicted RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 XYLBO75191 536 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 ATP5HO75947 161 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 PIGNO95427 931 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 LTA4HP09960 611 aaKnown RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 CCR10P46092 362 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 GRIA4P48058 902 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 STK19P49842 368 aaPredicted RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 PRKAA2P54646 552 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 TUBB3Q13509 450 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 PEX6Q13608 980 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 ZNF77Q15935 545 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 FAM83EQ2M2I3 478 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 FUT11Q495W5 492 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 TECRLQ5HYJ1 363 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 WDR75Q8IWA0 830 aaKnown RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 PIANPQ8IYJ0 282 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 KIF2BQ8N4N8 673 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 SREK1Q8WXA9 508 aaKnown RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 IRF7Q92985 503 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 KLHL29Q96CT2 875 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 MYO19Q96H55 970 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 AARSD1Q9BTE6 412 aaKnown RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 NMUR2Q9GZQ4 415 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 DRC3Q9H069 523 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 FAM96AQ9H5X1 160 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 MAGEE1Q9HCI5 957 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 ARHGEF3Q9NR81 526 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 INTS10Q9NVR2 710 aaKnown RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 CORO1CQ9ULV4 474 aaPredicted RBP16.95■□□□□ 0.3
DDX41-201ENST00000330503 CHD7Q9P2D1 2997 aa16.95■□□□□ 0.3
DDX41-201ENST00000330503 CFAP73A6NFT4 308 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 STX7O15400 261 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 CA3P07451 260 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 ALPIP09923 528 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SRCP12931 536 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 NQO1P15559 274 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 ALOX15P16050 662 aaPredicted RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 PMLP29590 882 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 NAGLUP54802 743 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 ILF2Q12905 390 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 AGAP9Q5VTM2 703 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 ZNF781Q8N8C0 355 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 TXNDC5Q8NBS9 432 aaKnown RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 LEMD2Q8NC56 503 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 LPGAT1Q92604 370 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 SGF29Q96ES7 293 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SIKE1Q9BRV8 207 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 WWP1Q9H0M0 922 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 HACD3Q9P035 362 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 IL17CQ9P0M4 197 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 ZNF711Q9Y462 761 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 PDE4DIPQ5VU43 2346 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.94■□□□□ 0.3
DDX41-201ENST00000330503 HSPA4LO95757 839 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 CHRNGP07510 517 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 CEBPBP17676 345 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SLC26A3P40879 764 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 KCNC1P48547 511 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 SUOXP51687 545 aa16.94■□□□□ 0.3
DDX41-201ENST00000330503 EPHB1P54762 984 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms