RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 TMEM247A6NEH6 219 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 SLC22A2O15244 555 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 SIX3O95343 332 aaPredicted RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 ALDH4A1P30038 563 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 EIF1AXP47813 144 aaKnown RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 FOXD4Q12950 439 aaPredicted RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 NFATC3Q12968 1075 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 DHRS4L2Q6PKH6 230 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 PELI3Q8N2H9 469 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ARL10Q8N8L6 244 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ANKFN1Q8N957 763 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 NEURL2Q9BR09 285 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 TMEM181Q9P2C4 612 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ZNHIT2Q9UHR6 403 aa7.9□□□□□ -1.14
VMA21-201ENST00000330374 ZFC3H1O60293 1989 aaKnown RBP7.9□□□□□ -1.14
VMA21-201ENST00000330374 I6L893 689 aaPredicted RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 KDM1AO60341 852 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 TOMM70O94826 608 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 ALDOCP09972 364 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 MYF6P23409 242 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 RAD23AP54725 363 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 MLLT10P55197 1068 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 STRADAQ7RTN6 431 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 FUNDC1Q8IVP5 155 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 PCYOX1LQ8NBM8 494 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 DNERQ8NFT8 737 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 OR52K2Q8NGK3 314 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 EMID1Q96A84 441 aaPredicted RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 ACDQ96AP0 544 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 TAMM41Q96BW9 452 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 RNF145Q96MT1 663 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 GPR78Q96P69 363 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 C11orf84Q9BUA3 381 aaPredicted RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 GBA3Q9H227 469 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 QTRT2Q9H974 415 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 TBC1D13Q9NVG8 400 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 EXD2Q9NVH0 621 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 ANK1P16157 1881 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 TARM1B6A8C7 271 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 ARPC2O15144 300 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 LINC00032P0C843 101 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 BMP2P12643 396 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 CPB1P15086 417 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 IL7RP16871 459 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.152e-7■□□□□ 10.5
VMA21-201ENST00000330374 ARL1P40616 181 aaPredicted RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 ECT2LQ008S8 904 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 CREB5Q02930 508 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 TRAP1Q12931 704 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 GRB7Q14451 532 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 BTBD8Q5XKL5 378 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 GADL1Q6ZQY3 521 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 PDZD4Q76G19 769 aaPredicted RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 ERO1BQ86YB8 467 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 SLC7A5P1Q8MH63 180 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 SMG8Q8ND04 991 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 TUBGCP3Q96CW5 907 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 MUS81Q96NY9 551 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 OLFM1Q99784 485 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 MRPL57Q9BQC6 102 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 C9orf16Q9BUW7 83 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 EIF2AQ9BY44 585 aaKnown RBP7.9□□□□□ -1.15
VMA21-201ENST00000330374 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 PLEKHA5Q9HAU0 1116 aa7.9□□□□□ -1.15
VMA21-201ENST00000330374 UBFD1O14562 309 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 DCLK1O15075 740 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 KPNA6O60684 536 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 XYLBO75191 536 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 RSL1D1O76021 490 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 IPO13O94829 963 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CAPNS1P04632 268 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CAPN3P20807 821 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 NOS2P35228 1153 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 CD151P48509 253 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 NPY2RP49146 381 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 OAZ1P54368 228 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 DNASE1L3Q13609 305 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SPIDRQ14159 915 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 CCDC92Q53HC0 331 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 OTUD1Q5VV17 481 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 NAPEPLDQ6IQ20 393 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 TBPL2Q6SJ96 375 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 PIM3Q86V86 326 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 ZDHHC17Q8IUH5 632 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SLC15A3Q8IY34 581 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 SEPT8Q92599 483 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 HPS1Q92902 700 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 CRELD1Q96HD1 420 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 GLT1D1Q96MS3 346 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 FSD1LQ9BXM9 530 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 PDGFDQ9GZP0 370 aaPredicted RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 DNAI2Q9GZS0 605 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 EML4Q9HC35 981 aaKnown RBP7.89□□□□□ -1.15
VMA21-201ENST00000330374 STAP1Q9ULZ2 295 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 CRYL1Q9Y2S2 319 aa7.89□□□□□ -1.15
VMA21-201ENST00000330374 IGKV6-21A0A0C4DH24 114 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms